Detailed information of g885.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBU2645932.1, flagellar assembly protein T N-terminal domain-containing protein [bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q2VZV0Translation initiation factor IF-2 OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=infB PE=3 SV=1
Q2RMS0Translation initiation factor IF-2 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=infB PE=3 SV=2
A5FV21Translation initiation factor IF-2 OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=infB PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00022ActinActinFamilyInterproscan
PF11987IF-2Translation-initiation factor 2DomainInterproscan
PF04760IF2_NTranslation initiation factor IF-2, N-terminal regionDomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004000FamilyActin familyInterproscan
IPR020902Conserved_siteActin/actin-like conserved siteInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR036925Homologous_superfamilyTranslation initiation factor IF-2, domain 3 superfamilyInterproscan
IPR023115DomainTranslation initiation factor IF- 2, domain 3Interproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044145DomainTranslation initiation factor IF-2, domain IIInterproscan
IPR006847DomainTranslation initiation factor IF-2, N-terminalInterproscan
IPR000178FamilyTranslation initiation factor IF-2, bacterial-likeInterproscan
IPR015760FamilyTranslation initiation factor IF- 2Interproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR047173FamilySTE20-related kinase adapter protein alpha/beta-likeInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR039323FamilyAnkyrin repeat domain-containing protein 60Interproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR038180Homologous_superfamilyFlgT, N-terminal domain superfamilyInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR051092FamilyFYVE, RhoGEF and PH domain-containingInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR003280FamilyTwo pore domain potassium channelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11937ACTINInterproscan
PTHR24241NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan
PTHR43381TRANSLATION INITIATION FACTOR IF-2-RELATEDInterproscan
PTHR48014SERINE/THREONINE-PROTEIN KINASE FRAY2Interproscan
PTHR22677ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60Interproscan
PTHR12673FACIOGENITAL DYSPLASIA PROTEINInterproscan
PTHR11003POTASSIUM CHANNEL, SUBFAMILY KInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005885Cellular ComponentArp2/3 protein complexInterproscan
GO:0030479Cellular Componentactin cortical patchInterproscan
GO:0034314Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0032870Biological Processcellular response to hormone stimulusInterproscan
GO:0042277Molecular Functionpeptide bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006611Biological Processprotein export from nucleusInterproscan
GO:0032147Biological Processactivation of protein kinase activityInterproscan
GO:0043539Molecular Functionprotein serine/threonine kinase activator activityInterproscan
GO:1902554Cellular Componentserine/threonine protein kinase complexInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005089Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005267Molecular Functionpotassium channel activityInterproscan
GO:0015271Molecular Functionoutward rectifier potassium channel activityInterproscan
GO:0022841Molecular Functionpotassium ion leak channel activityInterproscan
GO:0030322Biological Processstabilization of membrane potentialInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17260ACTR2, ARP2; actin-related protein 2-Mitochondrial biogenesisko03029deepkoala
Exosomeko04147deepkoala

TOP