Detailed information of g8888.t1 in Montipora capitata

Genomic Location: Sc0000224:279002...285911
NR annotation: XP_015778350.1, PREDICTED: HMG1/2-like protein [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P07746High mobility group-T protein OS=Oncorhynchus mykiss OX=8022 PE=2 SV=2
P40621HMG1/2-like protein OS=Triticum aestivum OX=4565 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002244 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050342
all species →
FamilyHigh Mobility Group Box (HMGB)Interproscan
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112
all species →
HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008301
all species →
Molecular FunctionDNA binding, bendingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g8888.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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