Detailed information of g889.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047142658.1, probable ATP-dependent RNA helicase DHX37 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8IY37Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens OX=9606 GN=DHX37 PE=1 SV=1
O46072Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster OX=7227 GN=kz PE=1 SV=1
P34305Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans OX=6239 GN=rha-2 PE=3 SV=2
Gene familySubfamily
Ubiquitin FamilyDUB|OTU|OTU

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan
PF02338OTUOTU-like cysteine proteaseFamilyInterproscan
PF01323DSBADSBA-like thioredoxin domainDomainInterproscan
PF10585UBA_E1_SCCHUbiquitin-activating enzyme, SCCH domainDomainInterproscan
PF16190E1_FCCHUbiquitin-activating enzyme E1 FCCH domainDomainInterproscan
PF00899ThiFThiF familyDomainInterproscan
PF16191E1_4HBUbiquitin-activating enzyme E1 four-helix bundleDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR050704FamilyOTU domain-containing ubiquitin thioesteraseInterproscan
IPR003323DomainOTU domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001853DomainDSBA-like thioredoxin domainInterproscan
IPR051924FamilyGlutathione S-transferase Kappa/NadHInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR035985Homologous_superfamilyUbiquitin-activating enzymeInterproscan
IPR019572DomainUbiquitin-activating enzyme, SCCH domainInterproscan
IPR032418DomainUbiquitin-activating enzyme E1, FCCH domainInterproscan
IPR000011FamilyUbiquitin/SUMO-activating enzyme E1-likeInterproscan
IPR042302Homologous_superfamilyUbiquitin-activating enzyme E1, FCCH domain superfamilyInterproscan
IPR000594DomainTHIF-type NAD/FAD binding foldInterproscan
IPR032420DomainUbiquitin-activating enzyme E1, four-helix bundleInterproscan
IPR018074Conserved_siteUbiquitin-activating enzyme E1, conserved siteInterproscan
IPR045886FamilyThiF/MoeB/HesA familyInterproscan
IPR042063Homologous_superfamilyUbiquitin-activating enzyme E1, SCCH domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR026678FamilyINO80 complex subunit EInterproscan
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR050653FamilyProtease Inhibitors and Growth Factor AntagonistsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan
PTHR12419OTU DOMAIN CONTAINING PROTEINInterproscan
PTHR42943GLUTATHIONE S-TRANSFERASE KAPPAInterproscan
PTHR32343SERINE/ARGININE-RICH SPLICING FACTORInterproscan
PTHR10953UBIQUITIN-ACTIVATING ENZYME E1Interproscan
PTHR21812UNCHARACTERIZEDInterproscan
PTHR10913FOLLISTATIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004364Molecular Functionglutathione transferase activityInterproscan
GO:0004602Molecular Functionglutathione peroxidase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008641Molecular Functionubiquitin-like modifier activating enzyme activityInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0004839Molecular Functionubiquitin activating enzyme activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0032446Biological Processprotein modification by small protein conjugationInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0031011Cellular ComponentIno80 complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0030154Biological Processcell differentiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11669INO80E; INO80 complex subunit E-Ribosome biogenesisko03009deepkoala
Chromosome and associated proteinsko03036deepkoala

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