Detailed information of g890.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO49914.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P32479Protein HIR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HIR1 PE=1 SV=3
Q9USN3Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp13 PE=3 SV=3
Q6FVD3Protein HIR1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=HIR1 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08240ADH_NAlcohol dehydrogenase GroES-like domainDomainInterproscan
PF01012ETFElectron transfer flavoprotein domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF03850Tfb4Transcription factor Tfb4DomainInterproscan
PF10185MesdChaperone for wingless signalling and trafficking of LDL receptorFamilyInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013154DomainAlcohol dehydrogenase-like, N-terminalInterproscan
IPR011032Homologous_superfamilyGroES-like superfamilyInterproscan
IPR033948DomainElectron transfer flavoprotein, beta subunit, N-terminalInterproscan
IPR014730DomainElectron transfer flavoprotein, alpha/beta-subunit, N-terminalInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR012255FamilyElectron transfer flavoprotein, beta subunitInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR004600FamilyTFIIH subunit Tfb4/GTF2H3Interproscan
IPR002048DomainEF-hand domainInterproscan
IPR019330FamilyLRP chaperone MESDInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR050685FamilyLow-density lipoprotein receptorInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48106QUINONE OXIDOREDUCTASE PIG3-RELATEDInterproscan
PTHR21294ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNITInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR12831TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATEDInterproscan
PTHR16213UNCHARACTERIZEDInterproscan
PTHR17600MESODERM DEVELOPMENT CANDIDATE 2Interproscan
PTHR24270LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003960Molecular FunctionNADPH:quinone reductase activityInterproscan
GO:0016651Molecular Functionoxidoreductase activity, acting on NAD(P)HInterproscan
GO:0048038Molecular Functionquinone bindingInterproscan
GO:0070402Molecular FunctionNADPH bindingInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0048741Biological Processskeletal muscle fiber developmentInterproscan
GO:0055074Biological Processcalcium ion homeostasisInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03521fixA, etfB; electron transfer flavoprotein beta subunit-Membrane traffickingko04131deepkoala
Energy metabolism-deepkoala

TOP