Gene detail

Detailed information of g892.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_020618022.1, disabled homolog 2-interacting protein-like isoform X1 [Orbicella faveolata]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5VWQ8	Disabled homolog 2-interacting protein OS=Homo sapiens OX=9606 GN=DAB2IP PE=1 SV=2
Q3UHC7	Disabled homolog 2-interacting protein OS=Mus musculus OX=10090 GN=Dab2ip PE=1 SV=1
Q9QUH6	Ras/Rap GTPase-activating protein SynGAP OS=Rattus norvegicus OX=10116 GN=Syngap1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000049 (this species only)
Orthogroup (gene family)	OG0000516 (this species only)
Orthogroup (gene family)	OG0000657 (this species only)
Orthogroup (gene family)	OG0002585 (this species only)
Orthogroup (gene family)	OG0004036 (this species only)
Orthogroup (gene family)	OG0007046 (this species only)
Orthogroup (gene family)	OG0007723 (this species only)
Orthogroup (gene family)	OG0009764 (this species only)
Orthogroup (gene family)	OG0041238 (this species only)
Orthogroup (gene family)	OG0059739 (this species only)
Orthogroup (gene family)	OG0080667 (this species only)
Orthogroup (gene family)	OG0172127 (this species only)
Orthogroup (gene family)	OG0173374 (this species only)
Orthogroup (gene family)	OG0173775 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF01965 all species →	DJ-1_PfpI	DJ-1/PfpI family	Domain	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00616 all species →	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan
PF12004 all species →	DAB2P_C	Disabled homolog 2-interacting protein, C-terminal domain	Domain	Interproscan
PF21382 all species →	IntS9_C	Integrator IntS9, C-terminal domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF01423 all species →	LSM	LSM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050108 all species →	Family	Cyclin-dependent kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001936 all species →	Domain	Ras GTPase-activating domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR039360 all species →	Family	Ras GTPase-activating protein	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR002818 all species →	Domain	DJ-1/PfpI	Interproscan
IPR021887 all species →	Domain	Disabled homolog 2-interacting protein, C-terminal domain	Interproscan
IPR027074 all species →	Family	Integrator complex subunit 9	Interproscan
IPR036866 all species →	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan
IPR048660 all species →	Domain	Integrator complex subunit 9-like, C-terminal domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR010920 all species →	Homologous_superfamily	LSM domain superfamily	Interproscan
IPR001163 all species →	Domain	Sm domain, eukaryotic/archaea-type	Interproscan
IPR047575 all species →	Domain	Sm domain	Interproscan
IPR027141 all species →	Family	Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3	Interproscan
IPR034102 all species →	Domain	Small nuclear ribonucleoprotein D1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24056 all species →	CELL DIVISION PROTEIN KINASE	Interproscan
PTHR10194 all species →	RAS GTPASE-ACTIVATING PROTEINS	Interproscan
PTHR46094 all species →	INTEGRATOR COMPLEX SUBUNIT 9	Interproscan
PTHR23338 all species →	SMALL NUCLEAR RIBONUCLEOPROTEIN SM	Interproscan
PTHR35558 all species →	SGNH_HYDRO DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0000083 all species →	Biological Process	obsolete regulation of transcription involved in G1/S transition of mitotic cell cycle	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004693 all species →	Molecular Function	cyclin-dependent protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan
GO:0016180 all species →	Biological Process	snRNA processing	Interproscan
GO:0032039 all species →	Cellular Component	integrator complex	Interproscan
GO:0034472 all species →	Biological Process	snRNA 3'-end processing	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0000243 all species →	Cellular Component	commitment complex	Interproscan
GO:0000387 all species →	Biological Process	spliceosomal snRNP assembly	Interproscan
GO:0005682 all species →	Cellular Component	U5 snRNP	Interproscan
GO:0005685 all species →	Cellular Component	U1 snRNP	Interproscan
GO:0005686 all species →	Cellular Component	U2 snRNP	Interproscan
GO:0005687 all species →	Cellular Component	U4 snRNP	Interproscan
GO:0005689 all species →	Cellular Component	U12-type spliceosomal complex	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0034715 all species →	Cellular Component	pICln-Sm protein complex	Interproscan
GO:0034719 all species →	Cellular Component	SMN-Sm protein complex	Interproscan
GO:0071011 all species →	Cellular Component	precatalytic spliceosome	Interproscan
GO:0071013 all species →	Cellular Component	catalytic step 2 spliceosome	Interproscan
GO:0097526 all species →	Cellular Component	spliceosomal tri-snRNP complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11087	SNRPD1, SMD1; small nuclear ribonucleoprotein D1	-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.