Gene detail

Detailed information of g895.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_020606361.1, uncharacterized protein LOC110045097 [Orbicella faveolata]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0DKT3	Turripeptide Gsp9.3 OS=Gemmula speciosa OX=439592 PE=2 SV=1
P0DKT2	Turripeptide Gsg9.2 OS=Gemmula sogodensis OX=439591 PE=2 SV=1
A6NE52	WD repeat-containing protein 97 OS=Homo sapiens OX=9606 GN=WDR97 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000183 (this species only)
Orthogroup (gene family)	OG0000750 (this species only)
Orthogroup (gene family)	OG0002166 (this species only)
Orthogroup (gene family)	OG0003046 (this species only)
Orthogroup (gene family)	OG0004370 (this species only)
Orthogroup (gene family)	OG0004550 (this species only)
Orthogroup (gene family)	OG0005532 (this species only)
Orthogroup (gene family)	OG0021253 (this species only)
Orthogroup (gene family)	OG0035139 (this species only)
Orthogroup (gene family)	OG0048251 (this species only)
Orthogroup (gene family)	OG0080365 (this species only)
Orthogroup (gene family)	OG0172462 (this species only)
Orthogroup (gene family)	OG0174235 (this species only)
Orthogroup (gene family)	OG0174555 (this species only)
Ubiquitin family	E1\|ThiF\|ThiF · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03227 all species →	GILT	Gamma interferon inducible lysosomal thiol reductase (GILT)	Family	Interproscan
PF15711 all species →	ILEI	Interleukin-like EMT inducer	Domain	Interproscan
PF02775 all species →	TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	Domain	Interproscan
PF02776 all species →	TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	Domain	Interproscan
PF00899 all species →	ThiF	ThiF family	Domain	Interproscan
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF00084 all species →	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029673 all species →	Family	Transmembrane protein 179	Interproscan
IPR004911 all species →	Family	Gamma interferon inducible lysosomal thiol reductase GILT	Interproscan
IPR039477 all species →	Domain	ILEI/PANDER domain	Interproscan
IPR052252 all species →	Family	Hyaluronic acid metabolism regulator	Interproscan
IPR000399 all species →	Conserved_site	TPP-binding enzyme, conserved site	Interproscan
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR011766 all species →	Domain	Thiamine pyrophosphate enzyme, TPP-binding	Interproscan
IPR017684 all species →	Family	Phosphonopyruvate decarboxylase	Interproscan
IPR051818 all species →	Family	Thiamine pyrophosphate-dependent decarboxylase	Interproscan
IPR012001 all species →	Domain	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	Interproscan
IPR000594 all species →	Domain	THIF-type NAD/FAD binding fold	Interproscan
IPR035985 all species →	Homologous_superfamily	Ubiquitin-activating enzyme	Interproscan
IPR029752 all species →	Conserved_site	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1	Interproscan
IPR045886 all species →	Family	ThiF/MoeB/HesA family	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR050653 all species →	Family	Protease Inhibitors and Growth Factor Antagonists	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31872 all species →	TRANSMEMBRANE PROTEIN 179	Interproscan
PTHR13234 all species →	GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT	Interproscan
PTHR15535 all species →	TRANSMEMBRANE PROTEIN 2-RELATED	Interproscan
PTHR19446 all species →	REVERSE TRANSCRIPTASES	Interproscan
PTHR42818 all species →	SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA	Interproscan
PTHR43267 all species →	TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE	Interproscan
PTHR10913 all species →	FOLLISTATIN-RELATED	Interproscan
PTHR45532 all species →	WD REPEAT-CONTAINING PROTEIN 97	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016671 all species →	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0030976 all species →	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0032923 all species →	Biological Process	organic phosphonate biosynthetic process	Interproscan
GO:0033980 all species →	Molecular Function	phosphonopyruvate decarboxylase activity	Interproscan
GO:0008641 all species →	Molecular Function	ubiquitin-like modifier activating enzyme activity	Interproscan
GO:0061503 all species →	Molecular Function	tRNA threonylcarbamoyladenosine dehydratase	Interproscan
GO:0061504 all species →	Biological Process	cyclic threonylcarbamoyladenosine biosynthetic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09459	E4.1.1.82; phosphonopyruvate decarboxylase	EC:4.1.1.82	Biosynthesis of various antibiotics	ko00998	deepkoala
K22132	tcdA; tRNA threonylcarbamoyladenosine dehydratase	-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.