Detailed information of g9.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_109069590.1, chorismate synthase [Azospirillum sp. TSH58]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B6IRC6Chorismate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=aroC PE=3 SV=1
Q13BI7Chorismate synthase OS=Rhodopseudomonas palustris (strain BisB5) OX=316057 GN=aroC PE=3 SV=1
Q2RR25Chorismate synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=aroC PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF06480FtsH_extFtsH ExtracellularFamilyInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF02114PhosducinPhosducinDomainInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF08501Shikimate_dh_NShikimate dehydrogenase substrate binding domainDomainInterproscan
PF01121CoaEDephospho-CoA kinaseDomainInterproscan
PF01488Shikimate_DHShikimate / quinate 5-dehydrogenaseFamilyInterproscan
PF03618Kinase-PPPaseKinase/pyrophosphorylaseFamilyInterproscan
PF01264Chorismate_syntChorismate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR050205FamilyCalcium-dependent Serine/Threonine Protein KinasesInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011546DomainPeptidase M41, FtsH extracellularInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR050928FamilyATP-dependent Zinc MetalloproteaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051499FamilyPhosducin-like regulatorInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR001200FamilyPhosducinInterproscan
IPR023196Homologous_superfamilyPhosducin, N-terminal domain superfamilyInterproscan
IPR024253DomainPhosducin, thioredoxin-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR050182FamilyCytochrome P450 family 2Interproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR001977FamilyDephospho-CoA kinaseInterproscan
IPR011342FamilyShikimate dehydrogenaseInterproscan
IPR013708DomainShikimate dehydrogenase substrate binding, N-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR022893FamilyShikimate dehydrogenase familyInterproscan
IPR046346Homologous_superfamilyAminoacid dehydrogenase-like, N-terminal domain superfamilyInterproscan
IPR006151DomainQuinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductaseInterproscan
IPR005177FamilyBifunctional kinase-pyrophosphorylaseInterproscan
IPR000453FamilyChorismate synthaseInterproscan
IPR020541Conserved_siteChorismate synthase, conserved siteInterproscan
IPR035904Homologous_superfamilyChorismate synthase AroC superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR24349SERINE/THREONINE-PROTEIN KINASEInterproscan
PTHR43655ATP-DEPENDENT PROTEASEInterproscan
PTHR46052PHOSDUCIN-LIKE PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24300CYTOCHROME P450 508A4-RELATEDInterproscan
PTHR21089SHIKIMATE DEHYDROGENASEInterproscan
PTHR21085CHORISMATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0004683Molecular Functioncalcium/calmodulin-dependent protein kinase activityInterproscan
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009931Molecular Functioncalcium-dependent protein serine/threonine kinase activityInterproscan
GO:0018105Biological Processpeptidyl-serine phosphorylationInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0046777Biological Processprotein autophosphorylationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005745Cellular Componentm-AAA complexInterproscan
GO:0034982Biological Processmitochondrial protein processingInterproscan
GO:0008277Biological Processregulation of G protein-coupled receptor signaling pathwayInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0006082Biological Processorganic acid metabolic processInterproscan
GO:0006805Biological Processxenobiotic metabolic processInterproscan
GO:0016712Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygenInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0004140Molecular Functiondephospho-CoA kinase activityInterproscan
GO:0015937Biological Processcoenzyme A biosynthetic processInterproscan
GO:0004764Molecular Functionshikimate 3-dehydrogenase (NADP+) activityInterproscan
GO:0019632Biological Processshikimate metabolic processInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009423Biological Processchorismate biosynthetic processInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0004107Molecular Functionchorismate synthase activityInterproscan
GO:0009073Biological Processaromatic amino acid family biosynthetic processInterproscan
GO:0010181Molecular FunctionFMN bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10379BFSP2; phakinin-Phenylalanine, tyrosine and tryptophan biosynthesisko00400deepkoala
Cytoskeleton proteinsko04812deepkoala

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