Detailed information of g900.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_052094205.1, speckle-type POZ protein-like isoform X3 [Mytilus californianus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q0IHH9Speckle-type POZ protein B OS=Xenopus laevis OX=8355 GN=spop-b PE=2 SV=1
Q7ZX06Speckle-type POZ protein A OS=Xenopus laevis OX=8355 GN=spop-a PE=2 SV=1
Q6P8B3Speckle-type POZ protein OS=Xenopus tropicalis OX=8364 GN=spop PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF04909Amidohydro_2AmidohydrolaseDomainInterproscan
PF05960DUF885Bacterial protein of unknown function (DUF885)FamilyInterproscan
PF06482EndostatinCollagenase NC10 and EndostatinDomainInterproscan
PF20010Collagen_trimerCollagen trimerization domainDomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF00917MATHMATH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR039808FamilyCadherinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR006680DomainAmidohydrolase-relatedInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR010281FamilyProtein of unknown function DUF885Interproscan
IPR010515DomainCollagenase NC10/endostatinInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR045463DomainCollagen type XV/XVIII, trimerization domainInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan
PTHR15922NEUROBLASTOMA-AMPLIFIED SEQUENCEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19855WD40 REPEAT PROTEIN 12, 37Interproscan
PTHR33361GLR0591 PROTEINInterproscan
PTHR24413SPECKLE-TYPE POZ PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0070939Cellular ComponentDsl1/NZR complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030162Biological Processregulation of proteolysisInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24744WDR37; WD repeat-containing protein 37-Ubiquitin systemko04121deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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