Detailed information of g901.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_003390483.1, PREDICTED: myosin-2 essential light chain-like isoform X2 [Amphimedon queenslandica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P54357Myosin-2 essential light chain OS=Drosophila melanogaster OX=7227 GN=Mlc-c PE=1 SV=1
P02605Myosin light chain 3, skeletal muscle isoform OS=Gallus gallus OX=9031 PE=1 SV=3
P02604Myosin light chain 1, skeletal muscle isoform OS=Gallus gallus OX=9031 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013KH_1KH domainDomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF13513HEAT_EZHEAT-like repeatRepeatInterproscan
PF07092TMEM106TM106 protein C-terminal domainDomainInterproscan
PF21002TMEM106_NTransmembrane protein 106 N-terminal regionFamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR003029DomainS1 domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR004087DomainK Homology domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR009790FamilyTransmembrane protein 106Interproscan
IPR048509DomainTransmembrane protein 106, C-terminal domainInterproscan
IPR048511DomainTransmembrane protein 106, N-terminalInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002153FamilyTransient receptor potential channel, canonicalInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR050230FamilyCalcium-Regulated Muscle Contraction and Cellular ProcessInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan
PTHR23346TRANSLATIONAL ACTIVATOR GCN1-RELATEDInterproscan
PTHR28556TRANSMEMBRANE PROTEIN 106BInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR24188ANKYRIN REPEAT PROTEINInterproscan
PTHR23048MYOSIN LIGHT CHAIN 1, 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000958Biological Processmitochondrial mRNA catabolic processInterproscan
GO:0000965Biological Processmitochondrial RNA 3'-end processingInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0006417Biological Processregulation of translationInterproscan
GO:0019887Molecular Functionprotein kinase regulator activityInterproscan
GO:0034198Biological Processcellular response to amino acid starvationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04984TRPA1, ANKTM1; transient receptor potential cation channel subfamily A member 1-Exosomeko04147deepkoala
Membrane traffickingko04131deepkoala
Ion channelsko04040deepkoala

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