Detailed information of g9018.t1 in Acropora digitifera

Genomic Location: chr4Alt:15580691...15584615
NR annotation: XP_044175940.1, striated muscle-specific serine/threonine-protein kinase-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Z2I4Roundabout homolog 3 OS=Mus musculus OX=10090 GN=Robo3 PE=1 SV=3
Q96MS0Roundabout homolog 3 OS=Homo sapiens OX=9606 GN=ROBO3 PE=1 SV=2
Q94887Neurexin-4 OS=Drosophila melanogaster OX=7227 GN=Nrx-IV PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR051170
all species →		FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036056
all species →		Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181
all species →		DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231
all species →		CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g9018.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g9018.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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