Gene detail

Detailed information of g902.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: KAJ7384136.1, DNA damage checkpoint control protein [Desmophyllum pertusum]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BQY8	Checkpoint protein HUS1 OS=Mus musculus OX=10090 GN=Hus1 PE=2 SV=1
O60921	Checkpoint protein HUS1 OS=Homo sapiens OX=9606 GN=HUS1 PE=1 SV=1
Q8K572	Checkpoint protein HUS1B OS=Mus musculus OX=10090 GN=Hus1b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000030 (this species only)
Orthogroup (gene family)	OG0000038 (this species only)
Orthogroup (gene family)	OG0000060 (this species only)
Orthogroup (gene family)	OG0000171 (this species only)
Orthogroup (gene family)	OG0001641 (this species only)
Orthogroup (gene family)	OG0003095 (this species only)
Orthogroup (gene family)	OG0003179 (this species only)
Orthogroup (gene family)	OG0005604 (this species only)
Orthogroup (gene family)	OG0006832 (this species only)
Orthogroup (gene family)	OG0006903 (this species only)
Orthogroup (gene family)	OG0021361 (this species only)
Orthogroup (gene family)	OG0032548 (this species only)
Orthogroup (gene family)	OG0171308 (this species only)
Orthogroup (gene family)	OG0171846 (this species only)
Orthogroup (gene family)	OG0174038 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|CUE · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01755 all species →	Glyco_transf_25	Glycosyltransferase family 25 (LPS biosynthesis protein)	Family	Interproscan
PF14223 all species →	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF00098 all species →	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan
PF01126 all species →	Heme_oxygenase	Heme oxygenase	Domain	Interproscan
PF04005 all species →	Hus1	Hus1-like protein	Family	Interproscan
PF02845 all species →	CUE	CUE domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002654 all species →	Family	Glycosyl transferase, family 25	Interproscan
IPR050757 all species →	Family	Collagen-modifying Glycosyltransferase 25	Interproscan
IPR052787 all species →	Family	Mitochondrial antiviral-signaling domain-containing protein	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR017972 all species →	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR002401 all species →	Family	Cytochrome P450, E-class, group I	Interproscan
IPR002051 all species →	Family	Haem oxygenase	Interproscan
IPR016053 all species →	Family	Haem oxygenase-like	Interproscan
IPR016084 all species →	Homologous_superfamily	Haem oxygenase-like, multi-helical	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR016580 all species →	Family	Cell cycle checkpoint, Hus1	Interproscan
IPR007150 all species →	Family	Checkpoint protein Hus1/Mec3	Interproscan
IPR039050 all species →	Family	GATA zinc finger domain-containing protein 1	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR003892 all species →	Domain	Ubiquitin system component CUE	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955 all species →	RETROTRANSPOSON	Interproscan
PTHR10730 all species →	PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER	Interproscan
PTHR21446 all species →	DUF3504 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR34222 all species →	GAG_PRE-INTEGRS DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24289 all species →	STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE	Interproscan
PTHR10720 all species →	HEME OXYGENASE	Interproscan
PTHR47501 all species →	TRANSPOSASE-RELATED	Interproscan
PTHR12900 all species →	MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1	Interproscan
PTHR13340 all species →	GATA ZINC FINGER DOMAIN-CONTAINING	Interproscan
PTHR16461 all species →	TOLL-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0050211 all species →	Molecular Function	procollagen galactosyltransferase activity	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0004508 all species →	Molecular Function	steroid 17-alpha-monooxygenase activity	Interproscan
GO:0042446 all species →	Biological Process	hormone biosynthetic process	Interproscan
GO:0042448 all species →	Biological Process	progesterone metabolic process	Interproscan
GO:0047442 all species →	Molecular Function	obsolete 17-alpha-hydroxyprogesterone aldolase activity	Interproscan
GO:0004392 all species →	Molecular Function	heme oxygenase (decyclizing) activity	Interproscan
GO:0006788 all species →	Biological Process	heme oxidation	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0042167 all species →	Biological Process	heme catabolic process	Interproscan
GO:0055072 all species →	Biological Process	obsolete iron ion homeostasis	Interproscan
GO:0000077 all species →	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0030896 all species →	Cellular Component	checkpoint clamp complex	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0031573 all species →	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0033314 all species →	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan
GO:0035861 all species →	Cellular Component	site of double-strand break	Interproscan
GO:0044778 all species →	Biological Process	meiotic DNA integrity checkpoint signaling	Interproscan
GO:0006325 all species →	Biological Process	chromatin organization	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0031624 all species →	Molecular Function	ubiquitin conjugating enzyme binding	Interproscan
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g902.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.