Gene detail

Detailed information of g909.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002161671.4, nicotinamidase isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P21369	Nicotinamidase OS=Escherichia coli (strain K12) OX=83333 GN=pncA PE=1 SV=1
Q9DAN9	Sperm axonemal maintenance protein CFAP97D1 OS=Mus musculus OX=10090 GN=Cfap97d1 PE=2 SV=1
B2RV13	Sperm axonemal maintenance protein CFAP97D1 OS=Homo sapiens OX=9606 GN=CFAP97D1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08785	Ku_PK_bind	Ku C terminal domain like	Domain	Interproscan
PF13879	Hmw_CFAP97	Hemingway/CFA97	Family	Interproscan
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan
PF06470	SMC_hinge	SMC proteins Flexible Hinge Domain	Domain	Interproscan
PF02463	SMC_N	RecF/RecN/SMC N terminal domain	Domain	Interproscan
PF13264	DUF4055	Domain of unknown function (DUF4055)	Family	Interproscan
PF00855	PWWP	PWWP domain	Domain	Interproscan
PF00857	Isochorismatase	Isochorismatase family	Family	Interproscan
PF04377	ATE_C	Arginine-tRNA-protein transferase, C terminus	Family	Interproscan
PF04376	ATE_N	Arginine-tRNA-protein transferase, N terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036494	Homologous_superfamily	Ku, C-terminal domain superfamily	Interproscan
IPR014893	Domain	Ku, C-terminal	Interproscan
IPR038792	Family	CFAP97 domain-containing protein 1/2	Interproscan
IPR029488	Family	Hemingway/CFA97	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR050540	Family	F-actin Monooxygenase Mical	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR010935	Domain	SMCs flexible hinge	Interproscan
IPR003395	Domain	RecF/RecN/SMC, N-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036277	Homologous_superfamily	SMCs flexible hinge superfamily	Interproscan
IPR025129	Domain	Domain of unknown function DUF4055	Interproscan
IPR000313	Domain	PWWP domain	Interproscan
IPR036380	Homologous_superfamily	Isochorismatase-like superfamily	Interproscan
IPR052347	Family	Isochorismatase Family Nicotinamidases	Interproscan
IPR000868	Domain	Isochorismatase-like	Interproscan
IPR017137	Family	Arginine-tRNA-protein transferase 1, eukaryotic	Interproscan
IPR007472	Domain	N-end rule aminoacyl transferase, C-terminal	Interproscan
IPR030700	Family	N-end rule aminoacyl transferase	Interproscan
IPR007471	Domain	N-end aminoacyl transferase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR33768	MIP11318P	Interproscan
PTHR23167	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	Interproscan
PTHR18937	STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER	Interproscan
PTHR11080	PYRAZINAMIDASE/NICOTINAMIDASE	Interproscan
PTHR21367	ARGININE-TRNA-PROTEIN TRANSFERASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005815	Cellular Component	microtubule organizing center	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0031941	Cellular Component	filamentous actin	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0007062	Biological Process	sister chromatid cohesion	Interproscan
GO:0008278	Cellular Component	cohesin complex	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0051276	Biological Process	chromosome organization	Interproscan
GO:0004057	Molecular Function	arginyl-tRNA--protein transferase activity	Interproscan
GO:0016598	Biological Process	protein arginylation	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03504	POLD3; DNA polymerase delta subunit 3	-	Cilium and associated proteins	ko03037	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala
			DNA repair and recombination proteins	ko03400	deepkoala