Gene detail

Detailed information of g91.t1 in Tripedalia maipoensis

Genomic Location: scaffold_1:5696749...5819772
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g91.t1

ATGGTGTGGCAGAATCTGTGCGTTGAATCTGGATTTGGTGGGGAAGAAACCGTCAACTTTGGGCCGAGACAGGAGACTGGTTCTAGTTTGTATCAAATTGATACACTAGCAACTATAACATCTGCAGATGAGGGAAAAGGAAGCCCAAGTATACTTGCTCTTTCAAATGCCTCTGGTTTAAGCCTGGCCCTAGATAACTCCTTGGTTATATTTGATGAAAGCTGCACAAGGCATGCCATGACCTTCACTTTTGGAAATCAGGTCAGCGCTCTAGCCTGGGCAGATGATAGCAGATTTTTGGCTGTAGCAGAAAGGTGCTCGCCTGTGCTACACCTGATCCACCTACAGACCGAAACTAAGCTGACAATGCATCCCAACGATATGGTTACGGCCGGTGCTACTGTGACATCCATGGTTTTTACGAAAGGCAACTCTCCAGATGACGTGGTTTTGGATATGATTTGTGACAACGGCCGCCTTCTACGTCTTGCTGACATTATGCTTAATCAGTTGAATAAAGCTGTACAAGAACGAAATATGGAGGAGATCCAAAGGGTTCAAAAGCTAGTGCAGAAGATTGCGCTCGATACGGCCAGTAGTGATGGTCATGGACACTCTTCCTGCCTTCAGCCGACTGACTCTTACCTTACGCTGGAAAATGGCAATGTCCTGATTGCAGATTCCGGTCTGTCAGAGTGGTCAGTTTGTCTGGGTAACATTACACGGGTACCATTTTATCTTGAGCCAGATTGTGGAATCACGAAAATGAGAAAGACCCGTAATGAAGATTATTTGATAACTCTAAATTCAGCGGGGCATCTTGCGATCTGGGACCTGCTCACATACGAAGTAGTGAGTTTCTGGCTCGACATGGAAATCCAAGATTTCGTCTTATTTTCTACTAACCTTTTGGAACAGGACAAACCCAGCGGTGCAGTCTTCGAAGACATGAAGATCGTGGTTCTTACAAAGGGGGAACAGAAGAAAAGTCTCCTCCAAGTTTTTACGTTGCCTCAACGGGAGCATGTCTACACGCTGCAGGTGTCGGCATGTTCTAAGCTTGCTGATCTGGATGAAAATCAGGATTCTATATACTTTATCGAGGGAGTGGAGAACCTCCTAAACGACAGTTGTGAAGAGGAGGAGTTTGCATTCGAGAAAGATGGCATGGACATTGAAACCATCCGCATACGATGCCTAACAGAAGCGTTCCCGGAGAACAGGTTCTCTCGATTACTGTACAAGAAGCATTTTGACAAAGCAGAAGCTTTCGCCAAAGAATACGGTTTGGCTGTTGAGCTTGTTTACAAGGTAAAAGCCACCTTTCTCCTGGATGCCTTGTGGCCACCCGGTTCCTCTCAGTCAATACATGTTCCAGATTACAAATGTGTGGCAGAGGAGCTCAAAAAGTGCCTGAACCAGATTAAGGACCTGGAGTATGTGATCAACTGCTGCCTGAAGGCTCAGATGCCAACCTTTGAGGCCACGTACGACATGCTGATGTATGGGAAAGAGTATTTCGAAAGCCTCGATTCTAAGCAAAACACGTCCTCACCTGCTGTGCAGAGTCTATTGGAAGGACTCAACAGGCTTGTCACGTTTAAAGTTGCATTCGGATTGAAAAAGTTCAGCGGACCCATTTGGAATGCGTTTCTCAATGCTTCCATCTTCGACGAAGTGACGAAATGCTTCTTGGCCAATCAGTTCGGTCCAGGCATACTGCTGTGGCGTCGACACCAGAGAGAATTTGAAGACGACTTTTCCAATGCCAAACTCTCAGAAATATTGAAGTCCATCTCGCCAAGTGTACCGTCGGAAAAGATCATTCCTTGGCTTAAAGAAGACTTCGTCCCTTTTGTGCTGACAGTTCTTCCAACTGGGCAGAACATTCTAGCTCACTGGTTGTGCGAACGAGCGTGTTCCATGGAGTTCAGTGAAGCACATGCCTGGCCACAAAATGCTTTGGAAATGGCCGAAGTTATGTTTAAAGCTTTCCAGGAAGTAGCCAAGACCAAGCATGGCCGTGGATTCGCCACGCCAGATCAATTTGCCACACAGATTTGCAAAGTCAGCCTGGCTTTTGGACCCTACGATATCAACACCAGTCTTTCTGAAAACAAAGTGCAGGGCTCTGCAATGGTGCAGTTGAGTGATCTGGTGAAAGGGCTGCGCGAGGTGTACCTGCTTCACTCAAAATATGCCTGCAAACTGTCCTTTGATGAGTATTACAAGGAAAACACCAAAACTATAGCTTTCAAACTGTTGGACAGAGTTCCTGCTGCAGAGCTGATCCCTAATACCATTGAACTCTATGTGCGACCTTATGCTAAGAACCACAACTTCAAGTTGGATAAACTGCTGTCAGACTACATCGAGAATTTACTTGCCAACGGAAAAAAAGATAGCAGATTTCGAGAGGCGAAGATCGTAGCTATAATTCATTCAATATCATCACCCGAGCTTCGATGCTCTGCTGTTCTGCTTTTCCTGGGCAAGGCCAGCATTCCGTGGAGTGAAGAGGTGCAGGACATTGTAGACAAGACTGTCAAGGAAAATCCCACGAATGCTTTACTTAAGAATCAGTTGCAGCTCACCGAGGCCAAAAAGATCCTGTTGGGGCATGGTGTGAGCGTGGTTACCTTTAATATGTCTGACTCAGCTAAGATTGAGGGATTCATCAAGTCCATCATTAAATCAGGTGGAGAGAACGCTTTAGACGATGCACTCAAGATCGGGAAGATGTACTTTCAGTCAACTCAGAAAGTCCACTTCTTTCAGCTCAGCCACTGGCTGCTCAGTGGAAAGGCCGGAGAATGTTGTGGCTTTTTAAAGAGTGTGGAGCTATCGATTGCCTTGAATTCTGGCATACAGATCATCAACTATGCTCTGGTTTGTTTGGAAGATCAGCCTGTTGATAAAGAGGATGAAGAATCTTTGCAAATCATCACAGAGGGTGCCATCGATGTTATGAGGACACTTTCGATGTTAGATGAAGATTTCAAAATAAAGTACAGGCAGGCCTTGCTTGACCTGAAGAGTATTCTGGCGCTTCAGCGCGAGTATGGAATCTACGTAAGTCGGCAAGAGTTTGAAGATGAATTGCAGAGGGAAAACCTCTTTGACACTTATGTCAAGAAGATAAAGGAAAACAACAACAAAGAAAAAGTATCTGTCGCTGAAGAGCTGAAGATTAAGAGGATTGCTGTGATCCTCCGCTGCCATCCCTTGTACATGCGATATGCGGTAGAGAAGGCATTGCTTAGCCGAAACCTTGAGGCAGAAATCGACAAGTTGTTTTCCACTCTTTGCAGTGGGACACCTTCCAGTGAGACCTTCAAGCTGCTGAAGAGAGTGATTCTGAGCTTCTTATTGGAAAACGTCAGCAACCTTGGCAGCCATGGAATCACGATCTGGGCAAAATACGTGGAGAAGTTCTACGACGTGGCTTGCTACTGCCTGTCGTTCTGTGATGCCGATGATCTGCGGGACTTTTTCGAAATGGCCAGAAACCTCAGCATGTCTCTGGCCGTTTCTCTGCAGTTTGAAAGCAGCGACTATGAAGAGGACTTACAGGGTAAAACTGATCACTTTGCCAAGAAGATGTTTGACAAAATATTTGAGGACGACGGACTTATTCTCAATGGGTCAGATATGATCCCGCTGCTAACAAAACTGAACATGGCCACTTTTAATCCGCACTGCAGTGAAGCTGTACGATTTAAGACGCAACACATTTCAGGGTGGATTGCAACCAGTCGATATAAGGGAGACGCAGAGCAGTATCCGATTCCAAGCATCATGAAATTCAGCCATAGCATCTGTCAAATTCTCCATGAAAACAATCTTTACACACGAGCTCACCAGTATGCACTGCAGTGCTTGGAGAACTGTTTACGTCATCATTCTATTATCAATGGCAGATATGAGGTTCCATCGCAGCTGATCTCCAAGGAATTTAGAACGATAATGGAACAGACTAAGAAAGTCGTTGATGACGTAGTGCCAAGAATTACCAAGTACATTAGCGGCCTCCAGACGGAGCTATTCTGGAAGATATTGCAGCACCGCCATGTCGACCAAGATCTGGCAGTAGCAATGCTTAGCTGTGTACCGCAAGGTTTCAGCCAACTGTCCTTGGCTCACATGAAGGAGAAATTTGGATCCCGTTTTCCTAGAATGCAGGTTGCTGCTAAAATCGGACAAGACTATTCTCTGCTCTGCATAAACCAGAAGATGCGCGATGAGTACAAAGCGATCGAGGACAGCGCCTTGTGGGGTAAAAGACTGTTGACTATGAAGATCCCTTGCAGTGACACCTTCACGCTAAGTGGGGACGGGAAAACAGCGTTGGCAAAGAAAGTTCTTTCACACAAGGATGCTACAATTGAACTGATAGACGAGTTTTGCGAGGCATTCGATGTGTCCAAGGTGGATGTCCTGTGCTTCTATTTGAAAGCGCTGCTGGTGCCAACTTCAGCCATGAGGCAGTTTCCCCTACCGGAAGTGATGGAAAAGTTGCGCACGCTCATTGCCGTTCTGCTTAGAAGGGAAGATATGAATCTCATGCATAATTTGAACGAGTGCTTTCAACGGATTAGCCCGTATGACTACGAAAGACTTCTTTTAGTCCTCAATACGATGAAGCAGATACTATCTCAGTCTAAACCAGGGATCGAAAAGGGTATACTGCTTCTGCAAGTACTGATGCAGTACAAACGAAAAGTTCCACCAAGTCACAGCGAAACCTCTGTTCTCAACGAAGCAGACGAGGAAGAGTTCATTAGAGGCGATCAAGCAGAGGCCCGCCTGGCCACGGAAAGGCTTCCCTTCCACCTTCTTATGGAGAACCAGCCATGGAAACTCATTACCACGGAGCTCATTTCACCGGAGGCAACTAACGAAATGGAGCCTATTGTCAAAGCCCTTGGTCTATCCGTCGACCAACTCTACTCCGTTGCCATATATGAGATTGGTACGAAAGCCATGGAAGCAACGTCCTCCAGTCAGGGTAAAGAGGACAAAGGGGGGTCTCATCCGAAGTACGAAGTGATGCAATGCCTTCTCAACAAGATGGAAAACCCGGAGATGATTATCGCGGCTGCGAAGTGGGTGGCCAAAGTACTACCCCTTGGAGAAGAGAAGGTTGAGGCCTTAAAGTTCTGCGTGGAAACGGCCAAGAAATGGGCTGCGATTTGTGGTCAGCAGTCAATATCAAAGGCCAAAGAGACCTATTACCGGTTCAACTCGCTCATGAAGCGGATTCACACTGAAAGTTTGCTTCTAGACCACAATATACAGGATGAGCAATATATGTTACTCTGCAACCAGCCTGCTGCACTTATTTGCCGTTTATACGAGGACTTTGGGACAGTCGATACTGCTTCGTTGGGGAAAATTTCCGCCGTGCAAGACATAAATCAACTGGTTGAGAAAATAGCAGATATCAATGATTGCCCGTTGGACAAACTGGAATTGCACTTATTGACCAAATGGCTATTCGGAAGTTCGTCGGAAAATCCCGCTGCCGCGGTGGATGCAGATATGACGATGCACAACGAAACGAATGCCATGCTGAATACCGAGGCTGCTGCAACGAGTGAGGAAGACAGTTTGAAAAGGGTTATTTACATGCTCAAGGGCCGTGATCCAAGCATAGTCATCCGCAGGCTGGACGCTCTGAAACCCGCGGATTCCTCGCACGCTGCGCGCTACAGCTTTAAGATCCGCTCCATGCAGGCGCTCTTTTCACTACTGCCCGCTTCCATTATTGAAGAGATAAAGAAGAAGACCTTAGACCACATCAGAGAGGAGTTTATTTGCTATGTGTACCTTCGTGAGTTAGAGACGCTGCACATGTCCCAGTCAGTCGTCGGCTTTTATAAGTGCAATAAAGAAGGGCTTGTGAAGGGCCTGTGGAGGAACCACAATCATGAACACGTGGCTGTGCGGCTCATCACGGACCTTTGCATAGATTATAAGATATACGAACCCCAGCTCTGGAACGTCCTGTTACCAAAACTACTCTCCTTTGGAATGATTCATTATTTGAAACATGTCCTGGTCACAGTGTCTGGTGTTCCTGAGTTGCGTGAGTTGCCTTGCTTACCAAACATGTGGAAAAGTGTGCTGAACCACCCCTTACAAATTGCCTCCTTACCACTGTCGGATGAAGATGAAAAAAATTGCCTGATCACCGCGCAATTGCTGCAGAGGTGCCCTGTGGTCCTGAGCTTAGACATTCTCGAGTTTTACGAGCTTTTTAAACGGCTTGAACTGTTCGTTCAAGCTATGATGTGTCTTTCCCTCGTACCCGATATGAGGCTTCGAGACAGCACTCTTCAGGAACTCTTCACCGTGGGAGGCATTGCGCGAATTCTAGAAGACGTCAAGAGACAACGCAACAAATATGGCGCCAATTGGCAGATTGATGAGATGGAAGAGGAGATCTTCCAGTTCGTGTATGAGCACCGGCTTTTTGCAGAGCTGCACGGGACGGAGCACTTTGACAGAATGCTTTCCTACCTCATTCAAGCCGACCTCGTGGAAACCCTGGTCCTGATGACCCTGCAGCTTGACAGGCTAAACAATGCCTTCCAGTTGGTACGAATGTACGCTCGAGCTCACCCCAAATCGGAAACAGCCCTGAGTGCCAGCGAACACACGTTAAACGATCTTCAAACTCTCACGGTAGGTGACTATAGTATGGTGTTATTGTTCTTGACACTTGCCAATTCATCACATTGCCTTCGGTGGCCCAACGCCCTCACTGAAAATCCCCTTTAG

Transcript

g91.t1

Protein

g91.t1

MVWQNLCVESGFGGEETVNFGPRQETGSSLYQIDTLATITSADEGKGSPSILALSNASGLSLALDNSLVIFDESCTRHAMTFTFGNQVSALAWADDSRFLAVAERCSPVLHLIHLQTETKLTMHPNDMVTAGATVTSMVFTKGNSPDDVVLDMICDNGRLLRLADIMLNQLNKAVQERNMEEIQRVQKLVQKIALDTASSDGHGHSSCLQPTDSYLTLENGNVLIADSGLSEWSVCLGNITRVPFYLEPDCGITKMRKTRNEDYLITLNSAGHLAIWDLLTYEVVSFWLDMEIQDFVLFSTNLLEQDKPSGAVFEDMKIVVLTKGEQKKSLLQVFTLPQREHVYTLQVSACSKLADLDENQDSIYFIEGVENLLNDSCEEEEFAFEKDGMDIETIRIRCLTEAFPENRFSRLLYKKHFDKAEAFAKEYGLAVELVYKVKATFLLDALWPPGSSQSIHVPDYKCVAEELKKCLNQIKDLEYVINCCLKAQMPTFEATYDMLMYGKEYFESLDSKQNTSSPAVQSLLEGLNRLVTFKVAFGLKKFSGPIWNAFLNASIFDEVTKCFLANQFGPGILLWRRHQREFEDDFSNAKLSEILKSISPSVPSEKIIPWLKEDFVPFVLTVLPTGQNILAHWLCERACSMEFSEAHAWPQNALEMAEVMFKAFQEVAKTKHGRGFATPDQFATQICKVSLAFGPYDINTSLSENKVQGSAMVQLSDLVKGLREVYLLHSKYACKLSFDEYYKENTKTIAFKLLDRVPAAELIPNTIELYVRPYAKNHNFKLDKLLSDYIENLLANGKKDSRFREAKIVAIIHSISSPELRCSAVLLFLGKASIPWSEEVQDIVDKTVKENPTNALLKNQLQLTEAKKILLGHGVSVVTFNMSDSAKIEGFIKSIIKSGGENALDDALKIGKMYFQSTQKVHFFQLSHWLLSGKAGECCGFLKSVELSIALNSGIQIINYALVCLEDQPVDKEDEESLQIITEGAIDVMRTLSMLDEDFKIKYRQALLDLKSILALQREYGIYVSRQEFEDELQRENLFDTYVKKIKENNNKEKVSVAEELKIKRIAVILRCHPLYMRYAVEKALLSRNLEAEIDKLFSTLCSGTPSSETFKLLKRVILSFLLENVSNLGSHGITIWAKYVEKFYDVACYCLSFCDADDLRDFFEMARNLSMSLAVSLQFESSDYEEDLQGKTDHFAKKMFDKIFEDDGLILNGSDMIPLLTKLNMATFNPHCSEAVRFKTQHISGWIATSRYKGDAEQYPIPSIMKFSHSICQILHENNLYTRAHQYALQCLENCLRHHSIINGRYEVPSQLISKEFRTIMEQTKKVVDDVVPRITKYISGLQTELFWKILQHRHVDQDLAVAMLSCVPQGFSQLSLAHMKEKFGSRFPRMQVAAKIGQDYSLLCINQKMRDEYKAIEDSALWGKRLLTMKIPCSDTFTLSGDGKTALAKKVLSHKDATIELIDEFCEAFDVSKVDVLCFYLKALLVPTSAMRQFPLPEVMEKLRTLIAVLLRREDMNLMHNLNECFQRISPYDYERLLLVLNTMKQILSQSKPGIEKGILLLQVLMQYKRKVPPSHSETSVLNEADEEEFIRGDQAEARLATERLPFHLLMENQPWKLITTELISPEATNEMEPIVKALGLSVDQLYSVAIYEIGTKAMEATSSSQGKEDKGGSHPKYEVMQCLLNKMENPEMIIAAAKWVAKVLPLGEEKVEALKFCVETAKKWAAICGQQSISKAKETYYRFNSLMKRIHTESLLLDHNIQDEQYMLLCNQPAALICRLYEDFGTVDTASLGKISAVQDINQLVEKIADINDCPLDKLELHLLTKWLFGSSSENPAAAVDADMTMHNETNAMLNTEAAATSEEDSLKRVIYMLKGRDPSIVIRRLDALKPADSSHAARYSFKIRSMQALFSLLPASIIEEIKKKTLDHIREEFICYVYLRELETLHMSQSVVGFYKCNKEGLVKGLWRNHNHEHVAVRLITDLCIDYKIYEPQLWNVLLPKLLSFGMIHYLKHVLVTVSGVPELRELPCLPNMWKSVLNHPLQIASLPLSDEDEKNCLITAQLLQRCPVVLSLDILEFYELFKRLELFVQAMMCLSLVPDMRLRDSTLQELFTVGGIARILEDVKRQRNKYGANWQIDEMEEEIFQFVYEHRLFAELHGTEHFDRMLSYLIQADLVETLVLMTLQLDRLNNAFQLVRMYARAHPKSETALSASEHTLNDLQTLTVGDYSMVLLFLTLANSSHCLRWPNALTENPL*

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10245 all species →	MRP-S22	Mitochondrial 28S ribosomal protein S22	Family	Interproscan
PF10493 all species →	Rod_C	Rough deal protein C-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019374 all species →	Family	Small ribosomal subunit protein mS22	Interproscan
IPR019527 all species →	Domain	RZZ complex, subunit KNTC1/ROD, C-terminal	Interproscan
IPR052802 all species →	Family	Kinetochore-associated RZZ complex protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15688 all species →	KINETOCHORE-ASSOCIATED PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000070 all species →	Biological Process	mitotic sister chromatid segregation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005828 all species →	Cellular Component	kinetochore microtubule	Interproscan
GO:0007094 all species →	Biological Process	mitotic spindle assembly checkpoint signaling	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:1903394 all species →	Biological Process	protein localization to kinetochore involved in kinetochore assembly	Interproscan
GO:1990423 all species →	Cellular Component	RZZ complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11577	KNTC1, ROD; kinetochore-associated protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.