Gene detail

Detailed information of g910.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_029206648.2, alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X1 [Acropora millepora]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5M854	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Rattus norvegicus OX=10116 GN=Mgat4a PE=2 SV=1
Q4R854	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Macaca fascicularis OX=9541 GN=MGAT4A PE=2 SV=1
O77836	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Bos taurus OX=9913 GN=MGAT4A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000515 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000964 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0001474 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0001488 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0002791 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0003363 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0008116 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0008567 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0011766 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0020718 (this species only) · gene tree & orthology
Transcription factor family	HMG · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan
PF12171 all species →	zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	Family	Interproscan
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF04666 all species →	Glyco_transf_54	N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region	Family	Interproscan
PF00505 all species →	HMG_box	HMG (high mobility group) box	Domain	Interproscan
PF12874 all species →	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF13975 all species →	gag-asp_proteas	gag-polyprotein putative aspartyl protease	Domain	Interproscan
PF02883 all species →	Alpha_adaptinC2	Adaptin C-terminal domain	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan
PF09066 all species →	B2-adapt-app_C	Beta2-adaptin appendage, C-terminal sub-domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR002113 all species →	Family	ADP/ATP carrier protein, eukaryotic type	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR001958 all species →	Family	Tetracycline resistance protein TetA/multidrug resistance protein MdtG-like	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR003604 all species →	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR018253 all species →	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR022755 all species →	Domain	Zinc finger, double-stranded RNA binding	Interproscan
IPR051964 all species →	Family	Multifunctional chaperone and stress response protein	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR006759 all species →	Family	Glycosyl transferase family 54	Interproscan
IPR009071 all species →	Domain	High mobility group box domain	Interproscan
IPR051965 all species →	Family	Chromatin Regulation and Neuronal Gene Expression	Interproscan
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR009028 all species →	Homologous_superfamily	Coatomer/calthrin adaptor appendage, C-terminal subdomain	Interproscan
IPR008152 all species →	Domain	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR012295 all species →	Homologous_superfamily	TBP domain superfamily	Interproscan
IPR013037 all species →	Homologous_superfamily	Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain	Interproscan
IPR015151 all species →	Domain	Beta-adaptin appendage, C-terminal subdomain	Interproscan
IPR013041 all species →	Homologous_superfamily	Clathrin adaptor, appendage, Ig-like subdomain superfamily	Interproscan
IPR052160 all species →	Family	Gypsy Retrotransposon Integrase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45635 all species →	ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED	Interproscan
PTHR24002 all species →	SOLUTE CARRIER FAMILY 22 MEMBER 18	Interproscan
PTHR44029 all species →	DNAJ HOMOLOG SUBFAMILY C MEMBER 21	Interproscan
PTHR45749 all species →	-	Interproscan
PTHR12062 all species →	N-ACETYLGLUCOSAMINYLTRANSFERASE VI	Interproscan
PTHR46040 all species →	HIGH MOBILITY GROUP PROTEIN 2	Interproscan
PTHR47266 all species →	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005471 all species →	Molecular Function	ATP:ADP antiporter activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0140021 all species →	Biological Process	mitochondrial ADP transmembrane transport	Interproscan
GO:1990544 all species →	Biological Process	mitochondrial ATP transmembrane transport	Interproscan
GO:1901029 all species →	Biological Process	negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0006810 all species →	Biological Process	transport	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005793 all species →	Cellular Component	endoplasmic reticulum-Golgi intermediate compartment	Interproscan
GO:0005795 all species →	Cellular Component	Golgi stack	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0008375 all species →	Molecular Function	acetylglucosaminyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0010468 all species →	Biological Process	regulation of gene expression	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0030131 all species →	Cellular Component	clathrin adaptor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00738	MGAT4A_B; alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase A/B	EC:2.4.1.145	Glycosyltransferases	ko01003	deepkoala
K05863	SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31	-	Transporters	ko02000	deepkoala
K09506	DNAJA5; DnaJ homolog subfamily A member 5	-	Chaperones and folding catalysts	ko03110	deepkoala
K24660	HMG20A; high mobility group protein 20A	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.