Gene detail

Detailed information of g910.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029206648.2, alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q5M854	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Rattus norvegicus OX=10116 GN=Mgat4a PE=2 SV=1
Q4R854	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Macaca fascicularis OX=9541 GN=MGAT4A PE=2 SV=1
O77836	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Bos taurus OX=9913 GN=MGAT4A PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF12171	zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	Family	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF04666	Glyco_transf_54	N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region	Family	Interproscan
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF13975	gag-asp_proteas	gag-polyprotein putative aspartyl protease	Domain	Interproscan
PF02883	Alpha_adaptinC2	Adaptin C-terminal domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF09066	B2-adapt-app_C	Beta2-adaptin appendage, C-terminal sub-domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR002067	Family	Mitochondrial carrier protein	Interproscan
IPR002113	Family	ADP/ATP carrier protein, eukaryotic type	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR001958	Family	Tetracycline resistance protein TetA/multidrug resistance protein MdtG-like	Interproscan
IPR001623	Domain	DnaJ domain	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR018253	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR022755	Domain	Zinc finger, double-stranded RNA binding	Interproscan
IPR051964	Family	Multifunctional chaperone and stress response protein	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR006759	Family	Glycosyl transferase family 54	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR051965	Family	Chromatin Regulation and Neuronal Gene Expression	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR009028	Homologous_superfamily	Coatomer/calthrin adaptor appendage, C-terminal subdomain	Interproscan
IPR008152	Domain	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012295	Homologous_superfamily	TBP domain superfamily	Interproscan
IPR013037	Homologous_superfamily	Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain	Interproscan
IPR015151	Domain	Beta-adaptin appendage, C-terminal subdomain	Interproscan
IPR013041	Homologous_superfamily	Clathrin adaptor, appendage, Ig-like subdomain superfamily	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45635	ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED	Interproscan
PTHR24002	SOLUTE CARRIER FAMILY 22 MEMBER 18	Interproscan
PTHR44029	DNAJ HOMOLOG SUBFAMILY C MEMBER 21	Interproscan
PTHR45749	-	Interproscan
PTHR12062	N-ACETYLGLUCOSAMINYLTRANSFERASE VI	Interproscan
PTHR46040	HIGH MOBILITY GROUP PROTEIN 2	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005471	Molecular Function	ATP:ADP antiporter activity	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0140021	Biological Process	mitochondrial ADP transmembrane transport	Interproscan
GO:1990544	Biological Process	mitochondrial ATP transmembrane transport	Interproscan
GO:1901029	Biological Process	negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0005635	Cellular Component	nuclear envelope	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005793	Cellular Component	endoplasmic reticulum-Golgi intermediate compartment	Interproscan
GO:0005795	Cellular Component	Golgi stack	Interproscan
GO:0006487	Biological Process	protein N-linked glycosylation	Interproscan
GO:0008375	Molecular Function	acetylglucosaminyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117	Cellular Component	membrane coat	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0030131	Cellular Component	clathrin adaptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05863	SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31	-	Glycosyltransferases	ko01003	deepkoala
			Chaperones and folding catalysts	ko03110	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala
			Transporters	ko02000	deepkoala