Detailed information of g917.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO49132.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9FYB7Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1
Q8VYA5Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1
Q8VE97Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyETS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF02020W2eIF4-gamma/eIF5/eIF2-epsilonRepeatInterproscan
PF02847MA3MA3 domainRepeatInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF10991Enc34_ssDNA-bdEnterobacter phage Enc34, ssDNA-binding proteinFamilyInterproscan
PF00178EtsEts-domainDomainInterproscan
PF01370EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR003307DomainW2 domainInterproscan
IPR045208FamilyInitiation factor 4GInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR003891DomainInitiation factor eIF-4 gamma, MA3Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR022595FamilyEnterobacter phage Enc34, ssDNA-binding proteinInterproscan
IPR000418DomainEts domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR046328FamilyETS familyInterproscan
IPR001509DomainNAD-dependent epimerase/dehydrataseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48038RIBONUCLEOPROTEIN RB97DInterproscan
PTHR23253EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11849ETSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0016281Cellular Componenteukaryotic translation initiation factor 4F complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan

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