Detailed information of g920.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MAD20421.1, hypothetical protein [Planctomycetaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42350Collagen alpha-2(I) chain OS=Aquarana catesbeiana OX=8400 GN=COL1A2 PE=2 SV=1
Q17RW2Collagen alpha-1(XXIV) chain OS=Homo sapiens OX=9606 GN=COL24A1 PE=1 SV=2
O54905Beta-1,3-galactosyltransferase 2 OS=Mus musculus OX=10090 GN=B3galt2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00160Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan
PF01762Galactosyl_TGalactosyltransferaseFamilyInterproscan
PF13520AA_permease_2Amino acid permeaseFamilyInterproscan
PF04665Pox_A32Poxvirus A32 proteinDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00328His_Phos_2Histidine phosphatase superfamily (branch 2)FamilyInterproscan
PF00169PHPH domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF00616RasGAPGTPase-activator protein for Ras-like GTPaseFamilyInterproscan
PF03607DCXDoublecortinFamilyInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002130DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR029000Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR002659FamilyGlycosyl transferase, family 31Interproscan
IPR050598FamilyCellular Amino Acid TransporterInterproscan
IPR002293FamilyAmino acid/polyamine transporter IInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006758FamilyPoxvirus A32Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000560FamilyHistidine phosphatase superfamily, clade-2Interproscan
IPR029033Homologous_superfamilyHistidine phosphatase superfamilyInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR052231FamilyRho GEF and signaling-related domain-containing proteinInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR001936DomainRas GTPase-activating domainInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR003533DomainDoublecortin domainInterproscan
IPR036572Homologous_superfamilyDoublecortin domain superfamilyInterproscan
IPR049626FamilyDCX/DCDC2-likeInterproscan
IPR050149FamilyCollagen superfamilyInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEInterproscan
PTHR46104GENE 9195-RELATED-RELATEDInterproscan
PTHR11214BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASEInterproscan
PTHR11785AMINO ACID TRANSPORTERInterproscan
PTHR47678TETRATRICOPEPTIDE REPEAT PROTEIN 31Interproscan
PTHR20963MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATEDInterproscan
PTHR45845RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATEDInterproscan
PTHR14149RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIFInterproscan
PTHR23004DOUBLECORTIN DOMAIN CONTAINING 2Interproscan
PTHR24023COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000413Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0015179Molecular FunctionL-amino acid transmembrane transporter activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003993Molecular Functionacid phosphatase activityInterproscan
GO:0052745Molecular Functioninositol phosphate phosphatase activityInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0043087Biological Processregulation of GTPase activityInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0046580Biological Processnegative regulation of Ras protein signal transductionInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13869SLC7A11; solute carrier family 7 (L-type amino acid transporter), member 11-Domain-containing proteins not elsewhere classifiedko04990deepkoala
Transportersko02000deepkoala

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