Detailed information of g923.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012560955.2, nucleolar GTP-binding protein 2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99LH1Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=2
Q13823Nucleolar GTP-binding protein 2 OS=Homo sapiens OX=9606 GN=GNL2 PE=1 SV=1
Q6C036Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=NOG2 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE1|ThiF|ThiF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08429PLU-1PLU-1-like proteinFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF12906RINGvRING-variant domainDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF01926MMR_HSR150S ribosome-binding GTPaseFamilyInterproscan
PF08153NGP1NTNGP1NT (NUC091) domainDomainInterproscan
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF00899ThiFThiF familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR013637DomainLysine-specific demethylase-like domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR047970DomainLysine-specific demethylase 5A, second PHD fingerInterproscan
IPR037869FamilySpp1/CFP1Interproscan
IPR011016DomainZinc finger, RING-CH-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR050755FamilyTRAFAC YlqF/YawG GTPases, Ribosome MaturationInterproscan
IPR023179Homologous_superfamilyGTP-binding protein, orthogonal bundle domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024929DomainNucleolar GTP-binding protein 2, circularly permuted GTPase motifInterproscan
IPR030378DomainCircularly permuted (CP)-type guanine nucleotide-binding (G) domainInterproscan
IPR006073DomainGTP binding domainInterproscan
IPR012971DomainNucleolar GTP-binding protein 2, N-terminal domainInterproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR050411FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR047165FamilyRho GTPase-activating protein 17/44/SH3BP1-likeInterproscan
IPR000594DomainTHIF-type NAD/FAD binding foldInterproscan
IPR045886FamilyThiF/MoeB/HesA familyInterproscan
IPR035985Homologous_superfamilyUbiquitin-activating enzymeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46174CXXC-TYPE ZINC FINGER PROTEIN 1Interproscan
PTHR46065E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBERInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR11089GTP-BINDING PROTEIN-RELATEDInterproscan
PTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan
PTHR141303BP-1 RELATED RHOGAPInterproscan
PTHR10953UBIQUITIN-ACTIVATING ENZYME E1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0048188Cellular ComponentSet1C/COMPASS complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0045329Biological Processcarnitine biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0032956Biological Processregulation of actin cytoskeleton organizationInterproscan
GO:0035020Biological Processregulation of Rac protein signal transductionInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032446Biological Processprotein modification by small protein conjugationInterproscan
GO:0071566Molecular FunctionUFM1 activating enzyme activityInterproscan
GO:0071569Biological Processprotein ufmylationInterproscan
GO:0008641Molecular Functionubiquitin-like modifier activating enzyme activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14537NUG2, GNL2; nuclear GTP-binding protein-Ribosome biogenesisko03009deepkoala

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