Detailed information of g924.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012560295.1, stromelysin-3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9XSZ5Interstitial collagenase OS=Equus caballus OX=9796 GN=MMP1 PE=2 SV=1
P03956Interstitial collagenase OS=Homo sapiens OX=9606 GN=MMP1 PE=1 SV=3
P21692Interstitial collagenase OS=Sus scrofa OX=9823 GN=MMP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35617PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

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