Detailed information of g926.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047142698.1, matrix metalloproteinase-2 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9NPA2Matrix metalloproteinase-25 OS=Homo sapiens OX=9606 GN=MMP25 PE=1 SV=1
Q5RES1Matrix metalloproteinase-14 OS=Pongo abelii OX=9601 GN=MMP14 PE=2 SV=1
Q10739Matrix metalloproteinase-14 OS=Rattus norvegicus OX=10116 GN=Mmp14 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyZBTB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan
PF19430TBC1D23_CTBC1 domain family member 23 C-terminalDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF02244Propep_M14Carboxypeptidase activation peptideDomainInterproscan
PF00246Peptidase_M14Zinc carboxypeptidaseDomainInterproscan
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF16363GDP_Man_DehydGDP-mannose 4,6 dehydrataseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR018486Conserved_siteHemopexin, conserved siteInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR039755FamilyTBC1 domain family member 23Interproscan
IPR045799DomainTBC1 domain family member 23, C-terminal domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR049765DomainRabankyrin-5, BTB/POZ domainInterproscan
IPR003146DomainCarboxypeptidase, activation peptideInterproscan
IPR000834DomainPeptidase M14, carboxypeptidase AInterproscan
IPR036990Homologous_superfamilyMetallocarboxypeptidase-like, propeptideInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006368FamilyGDP-mannose 4,6-dehydrataseInterproscan
IPR016040DomainNAD(P)-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR10201MATRIX METALLOPROTEINASEInterproscan
PTHR13297UNCHARACTERIZEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24118POTE ANKYRIN DOMAINInterproscan
PTHR11705PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,BInterproscan
PTHR23511SYNAPTIC VESICLE GLYCOPROTEIN 2Interproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR43715GDP-MANNOSE 4,6-DEHYDRATASEInterproscan
PTHR18867RAD50Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0099041Biological Processvesicle tethering to GolgiInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004181Molecular Functionmetallocarboxypeptidase activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:0008446Molecular FunctionGDP-mannose 4,6-dehydratase activityInterproscan
GO:0019673Biological ProcessGDP-mannose metabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0000722Biological Processtelomere maintenance via recombinationInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003691Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051880Molecular FunctionG-quadruplex DNA bindingInterproscan
GO:0070192Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0090305Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01711gmd, GMDS; GDPmannose 4,6-dehydrataseEC:4.2.1.47
Peptidases and inhibitorsko01002deepkoala
O-Antigen nucleotide sugar biosynthesisko00541deepkoala

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