Detailed information of g927.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3017442.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P24045Gamma-aminobutyric acid receptor subunit beta-4 OS=Gallus gallus OX=9031 GN=GABRB4 PE=2 SV=1
P18505Gamma-aminobutyric acid receptor subunit beta-1 OS=Homo sapiens OX=9606 GN=GABRB1 PE=1 SV=2
P08220Gamma-aminobutyric acid receptor subunit beta-1 OS=Bos taurus OX=9913 GN=GABRB1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00534Glycos_transf_1Glycosyl transferases group 1FamilyInterproscan
PF13489Methyltransf_23Methyltransferase domainDomainInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF00481PP2CProtein phosphatase 2CFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003937FamilyPotassium channel, voltage dependent, KCNQInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR026051FamilyChitobiosyldiphosphodolichol beta-mannosyltransferase ALG1-likeInterproscan
IPR001296DomainGlycosyl transferase, family 1Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR010233FamilyUbiquinone biosynthesis O-methyltransferaseInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR015655FamilyProtein phosphatase 2CInterproscan
IPR001932DomainPPM-type phosphatase-like domainInterproscan
IPR036457Homologous_superfamilyPPM-type phosphatase-like domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050370FamilyHairy and Enhancer of Split/HEY-relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47735POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR13036BETA1,4 MANNOSYLTRANSFERASEInterproscan
PTHR43464METHYLTRANSFERASEInterproscan
PTHR14885UNCHARACTERIZEDInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR47992PROTEIN PHOSPHATASEInterproscan
PTHR10985BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0000030Molecular Functionmannosyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0016757Molecular Functionglycosyltransferase activityInterproscan
GO:0004395Molecular Functionobsolete hexaprenyldihydroxybenzoate methyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006744Biological Processubiquinone biosynthetic processInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008425Molecular Function2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activityInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:0004722Molecular Functionprotein serine/threonine phosphatase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0035970Biological Processpeptidyl-threonine dephosphorylationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan
GO:0050767Biological Processregulation of neurogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17499PPM1G, PP2CG; protein phosphatase 1GEC:3.1.3.16
DNA repair and recombination proteinsko03400deepkoala
Glycosyltransferasesko01003deepkoala
Transportersko02000deepkoala
Protein phosphatases and associated proteinsko01009deepkoala

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