Detailed information of g9299.t1 in Montipora capitata

Genomic Location: Sc0000240:141173...153735
NR annotation: XP_029197456.2, E3 ubiquitin-protein ligase FANCL-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NW38E3 ubiquitin-protein ligase FANCL OS=Homo sapiens OX=9606 GN=FANCL PE=1 SV=2
Q9CR14E3 ubiquitin-protein ligase FANCL OS=Mus musculus OX=10090 GN=Fancl PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005741 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18891
all species →
FANCL_d3FANCL UBC-like domain 3DomainInterproscan
PF18890
all species →
FANCL_d2FANCL UBC-like domain 2DomainInterproscan
PF09765
all species →
FANCL_d1FANCL UBC-like domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026848
all species →
FamilyE3 ubiquitin-protein ligase FANCLInterproscan
IPR044037
all species →
DomainFANCL, UBC-like domain 3Interproscan
IPR043898
all species →
DomainFANCL, UBC-like domain 2Interproscan
IPR043003
all species →
Homologous_superfamilyFANCL, UBC-like domain 3 superfamilyInterproscan
IPR019162
all species →
DomainFanconi anemia complex, subunit FancL, WD-repeat containing domainInterproscan
IPR016135
all species →
Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13206
all species →
UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan
GO:0006513
all species →
Biological Processprotein monoubiquitinationInterproscan
GO:0036297
all species →
Biological Processinterstrand cross-link repairInterproscan
GO:0043240
all species →
Cellular ComponentFanconi anaemia nuclear complexInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g9299.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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