Gene detail

Detailed information of g930.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_032229022.1, heat shock protein beta-6 [Nematostella vectensis]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O13224	Heat shock protein beta-1 OS=Poeciliopsis lucida OX=56613 GN=hspb1 PE=2 SV=1
Q00649	Heat shock protein beta-1 OS=Gallus gallus OX=9031 GN=HSPB1 PE=2 SV=1
P02513	Heat shock protein Hsp-16.48/Hsp-16.49 OS=Caenorhabditis elegans OX=6239 GN=hsp-16.48 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000002 (this species only)
Orthogroup (gene family)	OG0000013 (this species only)
Orthogroup (gene family)	OG0000016 (this species only)
Orthogroup (gene family)	OG0000022 (this species only)
Orthogroup (gene family)	OG0000649 (this species only)
Orthogroup (gene family)	OG0002013 (this species only)
Orthogroup (gene family)	OG0004819 (this species only)
Orthogroup (gene family)	OG0006976 (this species only)
Orthogroup (gene family)	OG0007571 (this species only)
Orthogroup (gene family)	OG0007631 (this species only)
Orthogroup (gene family)	OG0008932 (this species only)
Orthogroup (gene family)	OG0015709 (this species only)
Orthogroup (gene family)	OG0048305 (this species only)
Orthogroup (gene family)	OG0173108 (this species only)
Orthogroup (gene family)	OG0173270 (this species only)
Transcription factor family	LRRFIP · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00147 all species →	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF01080 all species →	Presenilin	Presenilin	Family	Interproscan
PF09738 all species →	LRRFIP	LRRFIP family	Family	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan
PF13246 all species →	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan
PF00122 all species →	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF12409 all species →	P5-ATPase	P5-type ATPase cation transporter	Family	Interproscan
PF00011 all species →	HSP20	Hsp20/alpha crystallin family	Domain	Interproscan
PF11527 all species →	ARL2_Bind_BART	The ARF-like 2 binding protein BART	Family	Interproscan
PF13896 all species →	Glyco_transf_49	Glycosyl-transferase for dystroglycan	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002181 all species →	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR050373 all species →	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR014716 all species →	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR001108 all species →	Family	Peptidase A22A, presenilin	Interproscan
IPR006639 all species →	Family	Presenilin/signal peptide peptidase	Interproscan
IPR042524 all species →	Homologous_superfamily	Presenilin, C-terminal	Interproscan
IPR019139 all species →	Family	Leucine-rich repeat flightless-interacting protein 1/2	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR023299 all species →	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR006544 all species →	Family	P-type ATPase, subfamily V	Interproscan
IPR008250 all species →	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR047819 all species →	Domain	P5B-type ATPase, N-terminal	Interproscan
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR044492 all species →	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR018303 all species →	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR001757 all species →	Family	P-type ATPase	Interproscan
IPR002068 all species →	Domain	Alpha crystallin/Hsp20 domain	Interproscan
IPR001436 all species →	Family	Alpha crystallin/Small heat shock protein, animal type	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR042541 all species →	Homologous_superfamily	BART domain superfamily	Interproscan
IPR023379 all species →	Domain	BART domain	Interproscan
IPR038849 all species →	Family	ADP-ribosylation factor-like protein 2-binding protein	Interproscan
IPR043189 all species →	Family	Beta-1,4-glucuronyltransferase 1	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143 all species →	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan
PTHR10202 all species →	PRESENILIN	Interproscan
PTHR19212 all species →	LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR45630 all species →	CATION-TRANSPORTING ATPASE-RELATED	Interproscan
PTHR45640 all species →	HEAT SHOCK PROTEIN HSP-12.2-RELATED	Interproscan
PTHR15487 all species →	ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN	Interproscan
PTHR46420 all species →	BETA-1,4-GLUCURONYLTRANSFERASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004175 all species →	Molecular Function	endopeptidase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016485 all species →	Biological Process	protein processing	Interproscan
GO:0042500 all species →	Molecular Function	aspartic endopeptidase activity, intramembrane cleaving	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0140358 all species →	Molecular Function	P-type transmembrane transporter activity	Interproscan
GO:0006874 all species →	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0019829 all species →	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005758 all species →	Cellular Component	mitochondrial intermembrane space	Interproscan
GO:0042531 all species →	Biological Process	positive regulation of tyrosine phosphorylation of STAT protein	Interproscan
GO:0051457 all species →	Biological Process	maintenance of protein location in nucleus	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006486 all species →	Biological Process	protein glycosylation	Interproscan
GO:0015020 all species →	Molecular Function	glucuronosyltransferase activity	Interproscan
GO:0035269 all species →	Biological Process	protein O-linked mannosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13526	ATP13A2; cation-transporting P-type ATPase 13A2	EC:7.2.2.-	Enzymes with EC numbers	-	deepkoala
K21032	B4GAT1; beta-1,4-glucuronyltransferase 1	EC:2.4.1.-	Glycosyltransferases	ko01003	deepkoala
K26434	LRRFIP; leucine-rich repeat flightless-interacting protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.