Detailed information of g935.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ8333066.1, hypothetical protein SKAU_G00419620 [Synaphobranchus kaupii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9I8S4Antizyme inhibitor 2 OS=Xenopus laevis OX=8355 GN=azin2 PE=2 SV=1
P27118Ornithine decarboxylase (Fragment) OS=Gallus gallus OX=9031 GN=ODC1 PE=2 SV=1
P07805Ornithine decarboxylase OS=Trypanosoma brucei brucei OX=5702 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF08022FAD_binding_8FAD-binding domainDomainInterproscan
PF08030NAD_binding_6Ferric reductase NAD binding domainDomainInterproscan
PF04258Peptidase_A22BSignal peptide peptidaseFamilyInterproscan
PF04791LMBR1LMBR1-like membrane proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan
IPR000183FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR022653Binding_siteOrn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding siteInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR017938Homologous_superfamilyRiboflavin synthase-like beta-barrelInterproscan
IPR013112DomainFAD-binding 8Interproscan
IPR050369FamilyRespiratory burst oxidase/Ferric reductaseInterproscan
IPR013121DomainFerric reductase, NAD binding domainInterproscan
IPR017927DomainFAD-binding domain, ferredoxin reductase-typeInterproscan
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR000778FamilyCytochrome b245, heavy chainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR050410FamilyCCR4/nocturin mRNA turnover and transcriptionInterproscan
IPR007369FamilyPeptidase A22B, signal peptide peptidaseInterproscan
IPR006639FamilyPresenilin/signal peptide peptidaseInterproscan
IPR006876FamilyLMBR1-like membrane proteinInterproscan
IPR050854FamilyLysosomal Cobalamin Transport Escort Protein LMBD1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24064SOLUTE CARRIER FAMILY 22 MEMBERInterproscan
PTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEInterproscan
PTHR24243G-PROTEIN COUPLED RECEPTORInterproscan
PTHR11972NADPH OXIDASEInterproscan
PTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4Interproscan
PTHR12174SIGNAL PEPTIDE PEPTIDASEInterproscan
PTHR16130LYSOSOMAL COBALAMIN TRANSPORTER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0004586Molecular Functionornithine decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0033387Biological Processputrescine biosynthetic process from ornithineInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0006952Biological Processdefense responseInterproscan
GO:0016175Molecular Functionsuperoxide-generating NAD(P)H oxidase activityInterproscan
GO:0042554Biological Processsuperoxide anion generationInterproscan
GO:0043020Cellular ComponentNADPH oxidase complexInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0006465Biological Processsignal peptide processingInterproscan
GO:0033619Biological Processmembrane protein proteolysisInterproscan
GO:0042500Molecular Functionaspartic endopeptidase activity, intramembrane cleavingInterproscan
GO:0071458Cellular Componentobsolete integral component of cytoplasmic side of endoplasmic reticulum membraneInterproscan
GO:0071556Cellular Componentobsolete integral component of lumenal side of endoplasmic reticulum membraneInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0072665Biological Processprotein localization to vacuoleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14617LMBRD1; LMBR1 domain-containing protein 1-Efferocytosisko04148deepkoala
Peptidases and inhibitorsko01002deepkoala
Cobalamin transport and metabolismko04980deepkoala

TOP