Detailed information of g94.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_249035168.1, recombinase family protein [Pseudemcibacter aquimaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P06693Transposon Tn917 resolvase OS=Enterococcus faecalis OX=1351 GN=tnpR PE=3 SV=3
P03015Serine recombinase gin OS=Escherichia phage Mu OX=2681603 GN=gin PE=1 SV=2
Q38199Serine recombinase gin OS=Escherichia phage D108 OX=665033 GN=gin PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17857AAA_lid_1AAA+ lid domainDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF12775AAA_7P-loop containing dynein motor regionDomainInterproscan
PF02709Glyco_transf_7CN-terminal domain of galactosyltransferaseFamilyInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF12409P5-ATPaseP5-type ATPase cation transporterFamilyInterproscan
PF13246Cation_ATPaseCation transport ATPase (P-type)FamilyInterproscan
PF00122E1-E2_ATPaseE1-E2 ATPaseFamilyInterproscan
PF00239ResolvaseResolvase, N terminal domainDomainInterproscan
PF13408Zn_ribbon_recomRecombinase zinc beta ribbon domainDomainInterproscan
PF07508RecombinaseRecombinaseDomainInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan
PF17039Glyco_tran_10_NFucosyltransferase, N-terminalDomainInterproscan
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041589DomainDynein heavy chain 3, AAA+ lid domainInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR045906FamilySerine/threonine-protein kinase ULK4Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR003859FamilyBeta-1,4-galactosyltransferaseInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR027791DomainGalactosyltransferase, C-terminalInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR044492DomainP-type ATPase, haloacid dehalogenase domainInterproscan
IPR006544FamilyP-type ATPase, subfamily VInterproscan
IPR047819DomainP5B-type ATPase, N-terminalInterproscan
IPR023299Homologous_superfamilyP-type ATPase, cytoplasmic domain NInterproscan
IPR023298Homologous_superfamilyP-type ATPase, transmembrane domain superfamilyInterproscan
IPR008250Homologous_superfamilyP-type ATPase, A domain superfamilyInterproscan
IPR018303PTMP-type ATPase, phosphorylation siteInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR001757FamilyP-type ATPaseInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR006119DomainResolvase, N-terminal catalytic domainInterproscan
IPR050639FamilySite-specific recombinase resolvaseInterproscan
IPR011109DomainDNA-binding recombinase domainInterproscan
IPR025827DomainRecombinase zinc beta ribbon domainInterproscan
IPR036162Homologous_superfamilyResolvase-like, N-terminal catalytic domain superfamilyInterproscan
IPR038109Homologous_superfamilyDNA-binding recombinase domain superfamilyInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR020904Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR031481DomainFucosyltransferase, N-terminalInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45703DYNEIN HEAVY CHAINInterproscan
PTHR46240SER/THR PROTEIN KINASE ULK4Interproscan
PTHR19300BETA-1,4-GALACTOSYLTRANSFERASEInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR45630CATION-TRANSPORTING ATPASE-RELATEDInterproscan
PTHR30461DNA-INVERTASE FROM LAMBDOID PROPHAGEInterproscan
PTHR43157PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR48350ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016757Molecular Functionglycosyltransferase activityInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0008378Molecular Functiongalactosyltransferase activityInterproscan
GO:0070085Biological ProcessglycosylationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0140358Molecular FunctionP-type transmembrane transporter activityInterproscan
GO:0019829Molecular FunctionATPase-coupled monoatomic cation transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005215Molecular Functiontransporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000150Molecular FunctionDNA strand exchange activityInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14464FUT-1, FucTC; alpha-1,3-fucosyltransferaseEC:2.4.1.-
Cell growth-deepkoala
Enzymes with EC numbers-deepkoala
Retinol metabolismko00830deepkoala
Various types of N-glycan biosynthesisko00513deepkoala

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