Genomic Location: chr4Alt:24024122...24053795
NR annotation: XP_029213827.2, uncharacterized protein LOC114977326 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families
| CDS |
| g9404.t2 |
| Transcript |
| chr4Alt.g9404.t2 |
| Protein |
| chr4Alt.g9404.t2 |
| UniProt accession | Description |
|---|---|
| P35444 | Cartilage oligomeric matrix protein OS=Rattus norvegicus OX=10116 GN=Comp PE=1 SV=1 |
| Q8JHW2 | Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2 |
| P49747 | Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13385 all species → | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF12947 all species → | EGF_3 | EGF domain | Domain | Interproscan |
| PF02412 all species → | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| PF05735 all species → | TSP_C | Thrombospondin C-terminal region | Family | Interproscan |
| PF07645 all species → | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001881 all species → | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR000742 all species → | Domain | EGF-like domain | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR028974 all species → | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR008859 all species → | Domain | Thrombospondin, C-terminal | Interproscan |
| IPR018097 all species → | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR024731 all species → | Domain | EGF domain | Interproscan |
| IPR002126 all species → | Domain | Cadherin-like | Interproscan |
| IPR009030 all species → | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR003367 all species → | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| IPR017897 all species → | Repeat | Thrombospondin, type 3 repeat | Interproscan |
| IPR015919 all species → | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR020894 all species → | Conserved_site | Cadherin conserved site | Interproscan |
| IPR049883 all species → | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10199 all species → | THROMBOSPONDIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0062023 all species → | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0005576 all species → | Cellular Component | extracellular region | Interproscan |
| GO:0007155 all species → | Biological Process | cell adhesion | Interproscan |
| GO:0007156 all species → | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
g9404.t2.
