Detailed information of g941.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAB4004771.1, transposon Tf2-1 poly [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
Q91994Homeobox protein OTX1 B OS=Danio rerio OX=7955 GN=otx1b PE=2 SV=1
Q63410Homeobox protein OTX1 OS=Rattus norvegicus OX=10116 GN=Otx1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF19913WCOBWolframin C-terminal OB-fold domainDomainInterproscan
PF20053WC-richWolframin cysteine-rich domainFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF01365RYDR_ITPRRIH domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR026209FamilyWolframin familyInterproscan
IPR045461DomainWolframin, OB-fold domainInterproscan
IPR045400DomainWolframin, cysteine-rich domainInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050569FamilyTrace Amine-Associated ReceptorInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR015925FamilyRyanodine/Inositol 1,4,5-trisphosphate receptorInterproscan
IPR000493FamilyInositol 1,4,5-trisphosphate receptorInterproscan
IPR000699DomainRIH domainInterproscan
IPR035910Homologous_superfamilyRyR/IP3 receptor binding core, RIH domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45793HOMEOBOX PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13098WOLFRAMINInterproscan
PTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13715RYANODINE RECEPTOR AND IP3 RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0055074Biological Processcalcium ion homeostasisInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005220Molecular Functioninositol 1,4,5-trisphosphate-gated calcium channel activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0016529Cellular Componentsarcoplasmic reticulumInterproscan
GO:0030667Cellular Componentsecretory granule membraneInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0051209Biological Processrelease of sequestered calcium ion into cytosolInterproscan
GO:0070679Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan

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