Detailed information of g944.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_046582903.1, intraflagellar transport protein 27 homolog [Haliotis rubra]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q0VCN3Intraflagellar transport protein 27 homolog OS=Bos taurus OX=9913 GN=IFT27 PE=2 SV=1
Q9BW83Intraflagellar transport protein 27 homolog OS=Homo sapiens OX=9606 GN=IFT27 PE=1 SV=1
Q9D0P8Intraflagellar transport protein 27 homolog OS=Mus musculus OX=10090 GN=Ift27 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox
Transcription Factors FamilyZBTB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071RasRas familyDomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF13964Kelch_6Kelch motifRepeatInterproscan
PF01145Band_7SPFH domain / Band 7 familyFamilyInterproscan
PF03483B3_4B3/4 domainDomainInterproscan
PF18262PhetRS_B1Phe-tRNA synthetase beta subunit B1 domainDomainInterproscan
PF07496zf-CWCW-type Zinc FingerDomainInterproscan
PF17759tRNA_synthFbetaPhenylalanyl tRNA synthetase beta chain CLM domainDomainInterproscan
PF03484B5tRNA synthetase B5 domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR001107DomainBand 7 domainInterproscan
IPR027705FamilyFlotillin familyInterproscan
IPR036013Homologous_superfamilyBand 7/SPFH domain superfamilyInterproscan
IPR005146DomainB3/B4 tRNA-binding domainInterproscan
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR040659DomainPhenylalanine--tRNA ligase beta subunit, B1 domainInterproscan
IPR011124DomainZinc finger, CW-typeInterproscan
IPR004531FamilyPhenylalanyl-tRNA synthetase, class IIc, beta subunit, archaeal/eukaryotic typeInterproscan
IPR041616DomainPhenylalanyl tRNA synthetase beta chain, core domainInterproscan
IPR005147DomaintRNA synthetase, B5-domainInterproscan
IPR020825Homologous_superfamilyPhenylalanyl-tRNA synthetase-like, B3/B4Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR045060FamilyPhenylalanine-tRNA ligase, class IIc, beta subunitInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR042634FamilyHomeobox protein MOX-1/MOX-2Interproscan
IPR029165FamilySpermatogenesis-associated serine-rich protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23215ZINC FINGER PROTEIN 207Interproscan
PTHR24412KELCH PROTEINInterproscan
PTHR13806FLOTILLIN-RELATEDInterproscan
PTHR10947PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47Interproscan
PTHR47978-Interproscan
PTHR24328HOMEOBOX PROTEIN MOXInterproscan
PTHR35845SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0002090Biological Processregulation of receptor internalizationInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016600Cellular Componentflotillin complexInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0045807Biological Processpositive regulation of endocytosisInterproscan
GO:0070528Biological Processprotein kinase C signalingInterproscan
GO:0072659Biological Processprotein localization to plasma membraneInterproscan
GO:1901890Biological Processpositive regulation of cell junction assemblyInterproscan
GO:2000049Biological Processpositive regulation of cell-cell adhesion mediated by cadherinInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0009328Cellular Componentphenylalanine-tRNA ligase complexInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07851RASL10B; Ras-like protein family member 10B-GTP-binding proteinsko04031deepkoala
Transcription factorsko03000deepkoala
GTP-binding proteinsko04031deepkoala

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