Gene detail

Detailed information of g947.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: NP_001296610.1, protein kinase C beta type-like [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P05696	Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3
P17252	Protein kinase C alpha type OS=Homo sapiens OX=9606 GN=PRKCA PE=1 SV=4
P10102	Protein kinase C alpha type OS=Oryctolagus cuniculus OX=9986 GN=PRKCA PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000010 (this species only)
Orthogroup (gene family)	OG0000053 (this species only)
Orthogroup (gene family)	OG0000508 (this species only)
Orthogroup (gene family)	OG0000847 (this species only)
Orthogroup (gene family)	OG0001776 (this species only)
Orthogroup (gene family)	OG0002126 (this species only)
Orthogroup (gene family)	OG0002872 (this species only)
Orthogroup (gene family)	OG0003700 (this species only)
Orthogroup (gene family)	OG0004523 (this species only)
Orthogroup (gene family)	OG0005510 (this species only)
Orthogroup (gene family)	OG0021370 (this species only)
Orthogroup (gene family)	OG0173558 (this species only)
Orthogroup (gene family)	OG0173967 (this species only)
Orthogroup (gene family)	OG0174426 (this species only)
Orthogroup (gene family)	OG0174570 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00433 all species →	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan
PF13764 all species →	E3_UbLigase_R4	E3 ubiquitin-protein ligase UBR4	Family	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF16454 all species →	PI3K_P85_iSH2	Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain	Domain	Interproscan
PF01417 all species →	ENTH	ENTH domain	Repeat	Interproscan
PF05193 all species →	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026736 all species →	Family	Protein virilizer	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR050236 all species →	Family	Serine/threonine-protein kinases, AGC	Interproscan
IPR020454 all species →	Domain	Diacylglycerol/phorbol-ester binding	Interproscan
IPR017892 all species →	Domain	Protein kinase, C-terminal	Interproscan
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan
IPR014375 all species →	Family	Protein kinase C, alpha/beta/gamma types	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR025704 all species →	Domain	E3 ubiquitin ligase UBR4, C-terminal	Interproscan
IPR045189 all species →	Family	E3 ubiquitin ligase UBR4-like	Interproscan
IPR038830 all species →	Family	Coiled-coil domain-containing protein 186	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR051854 all species →	Family	Rho-type GTPase-activating protein	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR032498 all species →	Domain	PI3K regulatory subunit p85-related , inter-SH2 domain	Interproscan
IPR008942 all species →	Homologous_superfamily	ENTH/VHS	Interproscan
IPR013809 all species →	Domain	ENTH domain	Interproscan
IPR039273 all species →	Family	AP-4 complex accessory subunit Tepsin	Interproscan
IPR011249 all species →	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR007863 all species →	Domain	Peptidase M16, C-terminal	Interproscan
IPR052160 all species →	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23185 all species →	UNCHARACTERIZED	Interproscan
PTHR24356 all species →	SERINE/THREONINE-PROTEIN KINASE	Interproscan
PTHR23235 all species →	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan
PTHR21725 all species →	E3 UBIQUITIN-PROTEIN LIGASE UBR4	Interproscan
PTHR18911 all species →	CTCL TUMOR ANTIGEN HD-CL-01	Interproscan
PTHR18898 all species →	NUCLEOPROTEIN TPR-RELATED	Interproscan
PTHR46075 all species →	CHIMERIN FAMILY MEMBER	Interproscan
PTHR21514 all species →	UNCHARACTERIZED	Interproscan
PTHR47266 all species →	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0036396 all species →	Cellular Component	RNA N6-methyladenosine methyltransferase complex	Interproscan
GO:0080009 all species →	Biological Process	obsolete mRNA methylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0004697 all species →	Molecular Function	diacylglycerol-dependent serine/threonine kinase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0099518 all species →	Biological Process	vesicle cytoskeletal trafficking	Interproscan
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0006406 all species →	Biological Process	mRNA export from nucleus	Interproscan
GO:0017056 all species →	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:1901673 all species →	Biological Process	regulation of mitotic spindle assembly	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0032588 all species →	Cellular Component	trans-Golgi network membrane	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11137	TELO2, TEL2; telomere length regulation protein	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.