Detailed information of g95.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_274218080.1, DUF2924 domain-containing protein [Pseudovibrio exalbescens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q03350Thrombospondin-2 OS=Mus musculus OX=10090 GN=Thbs2 PE=1 SV=2
P07996Thrombospondin-1 OS=Homo sapiens OX=9606 GN=THBS1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyFork_head
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01323DSBADSBA-like thioredoxin domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00250ForkheadForkhead domainDomainInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF11149DUF2924Protein of unknown function (DUF2924)FamilyInterproscan
PF13899Thioredoxin_7Thioredoxin-likeDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF01762Galactosyl_TGalactosyltransferaseFamilyInterproscan
PF00132HexapepBacterial transferase hexapeptide (six repeats)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001853DomainDSBA-like thioredoxin domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001766DomainFork head domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR047519DomainForkhead box protein Q2-like, forkhead domainInterproscan
IPR050211FamilyForkhead box domain-containing proteinInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR030844FamilyPAN2-PAN3 deadenylation complex subunit PAN3Interproscan
IPR021322FamilyProtein of unknown function DUF2924Interproscan
IPR051099FamilyAnterior Gradient and Thioredoxin DomainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR002659FamilyGlycosyl transferase, family 31Interproscan
IPR047324FamilyGamma carbonic anhydrase-likeInterproscan
IPR050484FamilyTransferase Hexapeptide/Carbonic AnhydraseInterproscan
IPR001451RepeatHexapeptide repeatInterproscan
IPR011004Homologous_superfamilyTrimeric LpxA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan
PTHR11829FORKHEAD BOX PROTEINInterproscan
PTHR12272DEADENYLATION COMPLEX SUBUNIT PAN3Interproscan
PTHR15337ANTERIOR GRADIENT PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10676DYNEIN HEAVY CHAIN FAMILY PROTEINInterproscan
PTHR11214BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASEInterproscan
PTHR13061DYNACTIN SUBUNIT P25Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0008143Molecular Functionpoly(A) bindingInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005868Cellular Componentcytoplasmic dynein complexInterproscan
GO:0005930Cellular ComponentaxonemeInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0035721Biological Processintraciliary retrograde transportInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0060294Biological Processcilium movement involved in cell motilityInterproscan
GO:0097729Cellular Component9+2 motile ciliumInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07152SCO1; protein SCO1-Glycosyltransferasesko01003deepkoala
Mitochondrial biogenesisko03029deepkoala

TOP