Detailed information of g951.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAI0235432.1, hypothetical protein LSAT2_014070 [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PAJ1Breakpoint cluster region protein OS=Mus musculus OX=10090 GN=Bcr PE=1 SV=3
F1LXF1Breakpoint cluster region protein OS=Rattus norvegicus OX=10116 GN=Bcr PE=1 SV=4
P11274Breakpoint cluster region protein OS=Homo sapiens OX=9606 GN=BCR PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyTHAP
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20499DUF6729Domain of unknown function (DUF6729)DomainInterproscan
PF08610Pex16Peroxisomal membrane protein (Pex16)FamilyInterproscan
PF13664DUF4149Domain of unknown function (DUF4149)DomainInterproscan
PF13202EF-hand_5EF handDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00728Glyco_hydro_20Glycosyl hydrolase family 20, catalytic domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF21320HTH_65Rv2258c-like winged HTH domainDomainInterproscan
PF19057PH_19PH domainDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF10496Syntaxin-18_NSNARE-complex protein Syntaxin-18 N-terminus DomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046616DomainDomain of unknown function DUF6729Interproscan
IPR013919FamilyPeroxisome membrane protein, Pex16Interproscan
IPR053009FamilyXanthocillin Biosynthesis-Associated ProteinInterproscan
IPR025423DomainDomain of unknown function DUF4149Interproscan
IPR002048DomainEF-hand domainInterproscan
IPR028846FamilyRecoverin familyInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR038901FamilyHexosaminidase D-likeInterproscan
IPR015883DomainGlycoside hydrolase family 20, catalytic domainInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR003582DomainShKT domainInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR048711DomainS-adenosylmethionine-dependent methyltransferase Rv2258c-like, winged HTH domainInterproscan
IPR053173FamilyClass I-like SAM-binding MTaseInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR000008DomainC2 domainInterproscan
IPR037769FamilyAbr/BcrInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR000727DomainTarget SNARE coiled-coil homology domainInterproscan
IPR019529DomainSNARE-complex protein Syntaxin-18, N-terminalInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR050617FamilyE3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24401SI:CH211-243P7.3-RELATEDInterproscan
PTHR13299UNCHARACTERIZEDInterproscan
PTHR23241LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATEDInterproscan
PTHR23055CALCIUM BINDING PROTEINSInterproscan
PTHR21040UNCHARACTERIZEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR43157PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATEDInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR45128METHYLTRANSFERASE TYPE 11Interproscan
PTHR23182BREAKPOINT CLUSTER REGION PROTEIN BCRInterproscan
PTHR15959SYNTAXIN-18Interproscan
PTHR24099E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005778Cellular Componentperoxisomal membraneInterproscan
GO:0007031Biological Processperoxisome organizationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0015929Molecular Functionhexosaminidase activityInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13335PEX16; peroxin-16-Membrane traffickingko04131deepkoala
Other glycan degradationko00511deepkoala
Peroxisomeko04146deepkoala

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