Detailed information of g954.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047124558.1, pre-mRNA-splicing factor PRP46 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6CKE8Pre-mRNA-splicing factor PRP46 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=PRP46 PE=3 SV=1
Q922V4Pleiotropic regulator 1 OS=Mus musculus OX=10090 GN=Plrg1 PE=1 SV=1
Q2KID6Pleiotropic regulator 1 OS=Bos taurus OX=9913 GN=PLRG1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00723Glyco_hydro_15Glycosyl hydrolases family 15RepeatInterproscan
PF01074Glyco_hydro_38NGlycosyl hydrolases family 38 N-terminal domainDomainInterproscan
PF09261Alpha-mann_midAlpha mannosidase middle domainDomainInterproscan
PF07748Glyco_hydro_38CGlycosyl hydrolases family 38 C-terminal domainDomainInterproscan
PF21260Laman-like_domLysosomal alpha-mannosidase-like, central domainDomainInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011256Homologous_superfamilyRegulatory factor, effector binding domain superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR052118FamilyRho GTPase-activating regulatorInterproscan
IPR045241FamilyWD repeat Prp46/PLRG1-likeInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR011613DomainGH15-like domainInterproscan
IPR008734FamilyPhosphorylase kinase alpha/beta subunitInterproscan
IPR000602DomainGlycoside hydrolase family 38, N-terminal domainInterproscan
IPR037094Homologous_superfamilyGlycoside hydrolase family 38, central domain superfamilyInterproscan
IPR015341DomainGlycoside hydrolase family 38, central domainInterproscan
IPR027291Homologous_superfamilyGlycoside hydrolase 38, N-terminal domain superfamilyInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR050843FamilyGlycosyl Hydrolase Family 38Interproscan
IPR028995Homologous_superfamilyGlycoside hydrolase families 57/38, central domain superfamilyInterproscan
IPR011682DomainGlycosyl hydrolase family 38, C-terminalInterproscan
IPR048534DomainLysosomal alpha-mannosidase-like, central domainInterproscan
IPR013780Homologous_superfamilyGlycosyl hydrolase, all-betaInterproscan
IPR011330Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR050167FamilySerine/threonine-protein kinaseInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR020859DomainRoc domainInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15949TESTIS-EXPRESSED PROTEIN 264Interproscan
PTHR46150RHO GTPASE-ACTIVATING PROTEIN 100FInterproscan
PTHR19923WD40 REPEAT PROTEINPRL1/PRL2-RELATEDInterproscan
PTHR10749PHOSPHORYLASE B KINASE REGULATORY SUBUNITInterproscan
PTHR11607ALPHA-MANNOSIDASEInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23257SERINE-THREONINE PROTEIN KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000421Cellular Componentautophagosome membraneInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005657Cellular Componentreplication forkInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0061709Biological ProcessreticulophagyInterproscan
GO:0106300Biological Processprotein-DNA covalent cross-linking repairInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0046578Biological Processregulation of Ras protein signal transductionInterproscan
GO:0097060Cellular Componentsynaptic membraneInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005964Cellular Componentphosphorylase kinase complexInterproscan
GO:0005977Biological Processglycogen metabolic processInterproscan
GO:0004559Molecular Functionalpha-mannosidase activityInterproscan
GO:0006013Biological Processmannose metabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08844LRRK2; leucine-rich repeat kinase 2EC:2.7.11.1
Lysosomeko04142deepkoala
Exosomeko04147deepkoala

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