Detailed information of g955.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_046856180.1, SUN domain-containing protein 2-like [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A0B4KEE4Klaroid protein OS=Drosophila melanogaster OX=7227 GN=koi PE=2 SV=1
Q9SG79SUN domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SUN2 PE=1 SV=1
Q9FF75SUN domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SUN1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF14815NUDIX_4NUDIX domainDomainInterproscan
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07738Sad1_UNCSad1 / UNC-like C-terminal FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR029119DomainAdenine DNA glycosylase, C-terminalInterproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan
IPR044298FamilyAdenine/Thymine-DNA glycosylaseInterproscan
IPR003265DomainHhH-GPD domainInterproscan
IPR023170Homologous_superfamilyHelix-hairpin-helix, base-excision DNA repair, C-terminalInterproscan
IPR015797Homologous_superfamilyNUDIX hydrolase-like domain superfamilyInterproscan
IPR027705FamilyFlotillin familyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR037863FamilyRho GTPase-activating protein 6/36Interproscan
IPR049680FamilySolute carrier family 49-likeInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR012919DomainSUN domainInterproscan
IPR045119FamilySUN domain-containing protein 1-5Interproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR42944ADENINE DNA GLYCOSYLASEInterproscan
PTHR13806FLOTILLIN-RELATEDInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12635RHO-GTPASE-ACTIVATING PROTEIN 6 FAMILY MEMBERInterproscan
PTHR10924MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATEDInterproscan
PTHR12911SAD1/UNC-84-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0000701Molecular Functionpurine-specific mismatch base pair DNA N-glycosylase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0016798Molecular Functionhydrolase activity, acting on glycosyl bondsInterproscan
GO:0032357Molecular Functionoxidized purine DNA bindingInterproscan
GO:0034039Molecular Function8-oxo-7,8-dihydroguanine DNA N-glycosylase activityInterproscan
GO:0035485Molecular Functionadenine/guanine mispair bindingInterproscan
GO:0002090Biological Processregulation of receptor internalizationInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016600Cellular Componentflotillin complexInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0045807Biological Processpositive regulation of endocytosisInterproscan
GO:0070528Biological Processprotein kinase C signalingInterproscan
GO:0072659Biological Processprotein localization to plasma membraneInterproscan
GO:1901890Biological Processpositive regulation of cell junction assemblyInterproscan
GO:2000049Biological Processpositive regulation of cell-cell adhesion mediated by cadherinInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0051184Molecular Functionobsolete cofactor transmembrane transporter activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0034993Cellular Componentmeiotic nuclear membrane microtubule tethering complexInterproscan
GO:0043495Molecular Functionprotein-membrane adaptor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20631ARHGAP6; Rho GTPase-activating protein 6-Membrane traffickingko04131deepkoala

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