Detailed information of g956.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012557405.2, uncharacterized protein LOC100202714 isoform X4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9BXW4Microtubule-associated protein 1 light chain 3 gamma OS=Homo sapiens OX=9606 GN=MAP1LC3C PE=1 SV=1
Q2HJ23Microtubule-associated protein 1 light chain 3 alpha OS=Bos taurus OX=9913 GN=MAP1LC3A PE=2 SV=1
Q9H492Microtubule-associated protein 1 light chain 3 alpha OS=Homo sapiens OX=9606 GN=MAP1LC3A PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UBL|ATG8

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF10283zf-CCHHPBZ domainDomainInterproscan
PF05303GSKIP_domGSKIP domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF06017Myosin_TH1Unconventional myosin tail, actin- and lipid-bindingDomainInterproscan
PF02991ATG8Autophagy protein Atg8 ubiquitin likeDomainInterproscan
PF08773CathepsinC_excCathepsin C exclusion domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR023231Homologous_superfamilyGSKIP domain superfamilyInterproscan
IPR037395FamilyGSK3B-interacting proteinInterproscan
IPR007967DomainGSKIP domainInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR010926DomainClass I myosin tail homology domainInterproscan
IPR027731FamilyMicrotubule-associated protein 1A/1B light chain 3CInterproscan
IPR004241FamilyAutophagy protein Atg8 ubiquitin-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR014882DomainCathepsin C exclusionInterproscan
IPR036496Homologous_superfamilyCathepsin C, exclusion domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR12490UNCHARACTERIZEDInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019207Molecular Functionkinase regulator activityInterproscan
GO:0051018Molecular Functionprotein kinase A bindingInterproscan
GO:0060828Biological Processregulation of canonical Wnt signaling pathwayInterproscan
GO:0003774Molecular Functioncytoskeletal motor activityInterproscan
GO:0016459Cellular Componentmyosin complexInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000421Cellular Componentautophagosome membraneInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006995Biological Processcellular response to nitrogen starvationInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0097352Biological Processautophagosome maturationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10435MAP1LC; microtubule-associated protein 1 light chain-Cytoskeleton proteinsko04812deepkoala

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