Detailed information of g957.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012562627.2, kinesin-like protein KIF20B [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z5J4Retinoic acid-induced protein 1 OS=Homo sapiens OX=9606 GN=RAI1 PE=1 SV=2
Q9H4K1RIB43A-like with coiled-coils protein 2 OS=Homo sapiens OX=9606 GN=RIBC2 PE=1 SV=2
Q32LJ7RIB43A-like with coiled-coils protein 2 OS=Bos taurus OX=9913 GN=RIBC2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF08449UAAUAA transporter familyFamilyInterproscan
PF11822SANBR_BTBSANT and BTB domain regulator of CSR, BTB domainDomainInterproscan
PF13771zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan
PF05914RIB43ARIB43AFamilyInterproscan
PF15469Sec5Exocyst complex component Sec5RepeatInterproscan
PF21099POLQ_helicalDNA_pol_Q helicase like region helical domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF20470HTH_61Helix-turn-helix domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR013657FamilySLC35B1-4/HUT1Interproscan
IPR021777DomainSANT and BTB domain regulator of CSR, BTB domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR045902FamilySANBR-likeInterproscan
IPR052440FamilyTranscriptional Regulator and Chromatin RemodelerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR008805FamilyRIB43AInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR029175FamilyExocyst complex component EXOC2/Sec5Interproscan
IPR039481DomainExocyst complex component EXOC2/Sec5, N-terminal domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR048960DomainPOLQ-like, helical domainInterproscan
IPR050474FamilyHelicase Hel308/SKI2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR046931DomainDNA polymerase theta-like, helix-turn-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43092L-CYSTEINE DESULFHYDRASEInterproscan
PTHR10778SOLUTE CARRIER FAMILY 35 MEMBER BInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR20946UNCHARACTERIZEDInterproscan
PTHR14955RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20Interproscan
PTHR14517RIB43A-RELATEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13043EXOCYST COMPLEX COMPONENT SEC5Interproscan
PTHR47961DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0046964Molecular Function3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000145Cellular ComponentexocystInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006893Biological ProcessGolgi to plasma membrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15276SLC35B2, PAPST1; solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2-Cilium and associated proteinsko03037deepkoala
Transportersko02000deepkoala

TOP