Detailed information of g96.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_274218078.1, transcriptional repressor LexA [Pseudovibrio exalbescens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A0L9E2LexA repressor OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=lexA PE=3 SV=1
Q314F2LexA repressor OS=Oleidesulfovibrio alaskensis (strain ATCC BAA-1058 / DSM 17464 / G20) OX=207559 GN=lexA PE=3 SV=1
A4XL42LexA repressor OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=lexA PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyFork_head

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01726LexA_DNA_bindLexA DNA binding domainDomainInterproscan
PF00717Peptidase_S24Peptidase S24-likeDomainInterproscan
PF00250ForkheadForkhead domainDomainInterproscan
PF00017SH2SH2 domainDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF01426BAHBAH domainDomainInterproscan
PF02574S-methyl_transHomocysteine S-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR006199DomainLexA repressor, DNA-binding domainInterproscan
IPR006200FamilyTranscription regulator LexAInterproscan
IPR015927DomainPeptidase S24/S26A/S26B/S26CInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036286Homologous_superfamilyLexA/Signal peptidase-like superfamilyInterproscan
IPR039418DomainLexA-likeInterproscan
IPR006197FamilyPeptidase S24, LexA-likeInterproscan
IPR050077FamilyLexA repressorInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001766DomainFork head domainInterproscan
IPR050211FamilyForkhead box domain-containing proteinInterproscan
IPR000980DomainSH2 domainInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR051184FamilyTyrosine-phosphorylated adapter moleculeInterproscan
IPR025958FamilySID1 transmembrane familyInterproscan
IPR051065FamilyRas-related small GTPaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR050086FamilyMethionine Import ATP-bindingInterproscan
IPR030679FamilyABC-type amino acid transport system, ATPase component, HisP-typeInterproscan
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR003726DomainHomocysteine-binding domainInterproscan
IPR036589Homologous_superfamilyHomocysteine-binding domain superfamilyInterproscan
IPR051524FamilyBetaine-homocysteine S-methyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR33516LEXA REPRESSORInterproscan
PTHR11829FORKHEAD BOX PROTEINInterproscan
PTHR19969SH2-SH3 ADAPTOR PROTEIN-RELATEDInterproscan
PTHR12185SID1 TRANSMEMBRANE FAMILY MEMEBERInterproscan
PTHR45704RAS-LIKE FAMILY MEMBER 11Interproscan
PTHR43166AMINO ACID IMPORT ATP-BINDING PROTEINInterproscan
PTHR46120BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0009432Biological ProcessSOS responseInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030971Molecular Functionreceptor tyrosine kinase bindingInterproscan
GO:0035591Molecular Functionsignaling adaptor activityInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050658Biological ProcessRNA transportInterproscan
GO:0051033Molecular FunctionRNA transmembrane transporter activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0015424Molecular FunctionABC-type amino acid transporter activityInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0047150Molecular Functionbetaine-homocysteine S-methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02028ABC.PA.A; polar amino acid transport system ATP-binding proteinEC:7.4.2.1
DNA repair and recombination proteinsko03400deepkoala
Cysteine and methionine metabolismko00270deepkoala
Transportersko02000deepkoala

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