Gene detail

Detailed information of g962.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_031558032.1, neurogenic locus notch homolog protein 2-like isoform X2 [Actinia tenebrosa]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
G3I6Z6	Neurogenic locus notch homolog protein 1 OS=Cricetulus griseus OX=10029 GN=NOTCH1 PE=1 SV=2
Q07008	Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus OX=10116 GN=Notch1 PE=1 SV=3
P46531	Neurogenic locus notch homolog protein 1 OS=Homo sapiens OX=9606 GN=NOTCH1 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000000 (this species only)
Orthogroup (gene family)	OG0000002 (this species only)
Orthogroup (gene family)	OG0000065 (this species only)
Orthogroup (gene family)	OG0000376 (this species only)
Orthogroup (gene family)	OG0000715 (this species only)
Orthogroup (gene family)	OG0001877 (this species only)
Orthogroup (gene family)	OG0003340 (this species only)
Orthogroup (gene family)	OG0005570 (this species only)
Orthogroup (gene family)	OG0006510 (this species only)
Orthogroup (gene family)	OG0012158 (this species only)
Orthogroup (gene family)	OG0016723 (this species only)
Orthogroup (gene family)	OG0080495 (this species only)
Orthogroup (gene family)	OG0171945 (this species only)
Orthogroup (gene family)	OG0172540 (this species only)
Orthogroup (gene family)	OG0173437 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF17919 all species →	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00852 all species →	Glyco_transf_10	Glycosyltransferase family 10 (fucosyltransferase) C-term	Family	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00646 all species →	F-box	F-box domain	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF12661 all species →	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF07684 all species →	NODP	NOTCH protein	Family	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00066 all species →	Notch	LNR domain	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF06816 all species →	NOD	NOTCH protein	Family	Interproscan
PF02807 all species →	ATP-gua_PtransN	ATP:guanido phosphotransferase, N-terminal domain	Domain	Interproscan
PF00217 all species →	ATP-gua_Ptrans	ATP:guanido phosphotransferase, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR050569 all species →	Family	Trace Amine-Associated Receptor	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR051028 all species →	Family	Mitochondrial Solute Carrier	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR041577 all species →	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR001503 all species →	Family	Glycosyl transferase family 10	Interproscan
IPR038577 all species →	Homologous_superfamily	GT10-like, C-terminal domain superfamily	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR051075 all species →	Family	SCF complex subunit WD repeat-containing protein	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000800 all species →	Domain	Notch domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR013032 all species →	Conserved_site	EGF-like, conserved site	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR008297 all species →	Family	Notch	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR051830 all species →	Family	Neurogenic locus notch homolog	Interproscan
IPR011656 all species →	Domain	Notch, NODP domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR035993 all species →	Homologous_superfamily	Notch-like domain superfamily	Interproscan
IPR010660 all species →	Domain	Notch, NOD domain	Interproscan
IPR022414 all species →	Domain	ATP:guanido phosphotransferase, catalytic domain	Interproscan
IPR022413 all species →	Domain	ATP:guanido phosphotransferase, N-terminal	Interproscan
IPR036802 all species →	Homologous_superfamily	ATP:guanido phosphotransferase, N-terminal domain superfamily	Interproscan
IPR014746 all species →	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR000749 all species →	Family	ATP:guanido phosphotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24249 all species →	HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan
PTHR45678 all species →	MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR11929 all species →	ALPHA- 1,3 -FUCOSYLTRANSFERASE	Interproscan
PTHR19872 all species →	UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN	Interproscan
PTHR24033 all species →	EGF-LIKE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11547 all species →	ARGININE OR CREATINE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005313 all species →	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0006810 all species →	Biological Process	transport	Interproscan
GO:0015183 all species →	Molecular Function	L-aspartate transmembrane transporter activity	Interproscan
GO:0015810 all species →	Biological Process	aspartate transmembrane transport	Interproscan
GO:0015813 all species →	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043490 all species →	Biological Process	malate-aspartate shuttle	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0006486 all species →	Biological Process	protein glycosylation	Interproscan
GO:0008417 all species →	Molecular Function	fucosyltransferase activity	Interproscan
GO:0036065 all species →	Biological Process	fucosylation	Interproscan
GO:0046920 all species →	Molecular Function	alpha-(1->3)-fucosyltransferase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0007219 all species →	Biological Process	Notch signaling pathway	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan
GO:0050793 all species →	Biological Process	regulation of developmental process	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004111 all species →	Molecular Function	creatine kinase activity	Interproscan
GO:0046314 all species →	Biological Process	phosphocreatine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02599	NOTCH1; Notch 1	-	Endocrine resistance	ko01522	deepkoala
K10266	FBXW10; F-box and WD-40 domain protein 10	-	Ubiquitin system	ko04121	deepkoala
K11257	FUT11; galactoside 3-L-fucosyltransferase 11	EC:2.4.1.-	Enzymes with EC numbers	-	deepkoala
K15107	SLC25A18_22, GC; solute carrier family 25 (mitochondrial glutamate transporter), member 18/22	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.