Detailed information of g964.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012554812.1, uncharacterized protein LOC101240403 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3ED652-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MENG PE=1 SV=2
Q2HJ56Periodic tryptophan protein 1 homolog OS=Bos taurus OX=9913 GN=PWP1 PE=2 SV=1
Q13610Periodic tryptophan protein 1 homolog OS=Homo sapiens OX=9606 GN=PWP1 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13649Methyltransf_25Methyltransferase domainDomainInterproscan
PF01246Ribosomal_L24eRibosomal protein L24eDomainInterproscan
PF01695IstB_IS21IstB-like ATP binding proteinDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00226DnaJDnaJ domainDomainInterproscan
PF00939Na_sulph_sympSodium:sulfate symporter transmembrane regionFamilyInterproscan
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026669FamilyArsenite methyltransferase-likeInterproscan
IPR041698DomainMethyltransferase domain 25Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR038630Homologous_superfamilyRibosomal protein L24e/L24 superfamilyInterproscan
IPR000988FamilyLarge ribosomal subunit protein eL24-relatedInterproscan
IPR023442Conserved_siteLarge ribosomal subunit protein eL24, conserved siteInterproscan
IPR011017DomainTRASH domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR028350FamilyDNA replication protein DnaC/insertion sequence IstB-likeInterproscan
IPR002611DomainIstB-like ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR047661FamilyInsertion sequence IS21-like ATPase IstBInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR018253Conserved_siteDnaJ domain, conserved siteInterproscan
IPR001623DomainDnaJ domainInterproscan
IPR051339FamilyDnaJ homolog subfamily BInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR001898FamilySolute carrier family 13Interproscan
IPR031312Conserved_siteSodium/sulphate symporter, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR008422DomainHomeobox KN domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR043379FamilyAnkyrin and armadillo repeat-containing proteinInterproscan
IPR000225RepeatArmadilloInterproscan
IPR044285FamilyPeriodic tryptophan protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43675ARSENITE METHYLTRANSFERASEInterproscan
PTHR1079260S RIBOSOMAL PROTEIN L24Interproscan
PTHR30050CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAAInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERInterproscan
PTHR10283SOLUTE CARRIER FAMILY 13 MEMBERInterproscan
PTHR10390HOMEOBOX PROTEIN SIXInterproscan
PTHR46464ANK_REP_REGION DOMAIN-CONTAINING PROTEINInterproscan
PTHR14091PERIODIC TRYPTOPHAN PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0051085Biological Processchaperone cofactor-dependent protein refoldingInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09270SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)-Ribosomeko03011deepkoala
Transportersko02000deepkoala
Transcription factorsko03000deepkoala

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