Detailed information of g966.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAI6657976.1, heterogeneous nuclear ribonucleoprotein A3-like [Oopsacas minuta]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P07909Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster OX=7227 GN=Hrb98DE PE=2 SV=1
P51991Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2
Q8BG05Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00334NDKNucleoside diphosphate kinaseDomainInterproscan
PF05186Dpy-30Dpy-30 motifMotifInterproscan
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF01085HH_signalHedgehog amino-terminal signalling domainDomainInterproscan
PF01079HintHint moduleFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR034907DomainNucleoside diphosphate kinase-like domainInterproscan
IPR036850Homologous_superfamilyNucleoside diphosphate kinase-like domain superfamilyInterproscan
IPR001564FamilyNucleoside diphosphate kinaseInterproscan
IPR007858Conserved_siteDpy-30 motifInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050630FamilyWD repeat Echinoderm Microtubule-associated Protein-likeInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR009045Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR000320DomainHedgehog, N-terminal signalling domainInterproscan
IPR006141PTMIntein N-terminal splicing regionInterproscan
IPR003586DomainHint domain C-terminalInterproscan
IPR001657FamilyHedgehog proteinInterproscan
IPR050387FamilyHedgehog SignalingInterproscan
IPR036844Homologous_superfamilyHint domain superfamilyInterproscan
IPR001767DomainHedgehog protein, Hint domainInterproscan
IPR003587DomainHint domain N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR46161NUCLEOSIDE DIPHOSPHATE KINASEInterproscan
PTHR13720WD-40 REPEAT PROTEINInterproscan
PTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR11889HEDGEHOGInterproscan
PTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004550Molecular Functionnucleoside diphosphate kinase activityInterproscan
GO:0006183Biological ProcessGTP biosynthetic processInterproscan
GO:0006228Biological ProcessUTP biosynthetic processInterproscan
GO:0006241Biological ProcessCTP biosynthetic processInterproscan
GO:0003341Biological Processcilium movementInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:1902176Biological Processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathwayInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0007267Biological Processcell-cell signalingInterproscan
GO:0016539Biological Processintein-mediated protein splicingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0005113Molecular Functionpatched bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007224Biological Processsmoothened signaling pathwayInterproscan
GO:0016540Biological Processprotein autoprocessingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030915Cellular ComponentSmc5-Smc6 complexInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20790NME5; nucleoside diphosphate kinase homolog 5-Cilium and associated proteinsko03037deepkoala

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