Detailed information of g9678.t1.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: CAH3131023.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan

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