Gene detail

Detailed information of g968.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047132802.1, uncharacterized protein LOC105848108 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4ADV7	Guanine nucleotide exchange factor subunit RIC1 OS=Homo sapiens OX=9606 GN=RIC1 PE=1 SV=2
Q69ZJ7	Guanine nucleotide exchange factor subunit RIC1 OS=Mus musculus OX=10090 GN=Ric1 PE=1 SV=2
A0A2R8QPS5	Guanine nucleotide exchange factor subunit RIC1 OS=Danio rerio OX=7955 GN=ric1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07064	RIC1	RIC1	Family	Interproscan
PF00261	Tropomyosin	Tropomyosin	Coiled-coil	Interproscan
PF20920	DAXX_hist_bd	Death domain-associated protein 6, histone binding domain	Domain	Interproscan
PF04430	DUF498	Protein of unknown function (DUF498/DUF598)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009771	Domain	Ribosome control protein 1	Interproscan
IPR040096	Family	RAB6A-GEF complex partner protein 1	Interproscan
IPR000533	Family	Tropomyosin	Interproscan
IPR046426	Homologous_superfamily	Daxx, histone-binding domain superfamily	Interproscan
IPR046378	Domain	Daxx, histone-binding domain	Interproscan
IPR007523	Family	NDUFAF3/Mth938 domain-containing protein	Interproscan
IPR036748	Homologous_superfamily	MTH938-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22746	RAB6A-GEF COMPLEX PARTNER PROTEIN 1	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR19269	TROPOMYOSIN	Interproscan
PTHR21192	NUCLEAR PROTEIN E3-3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000139	Cellular Component	Golgi membrane	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0034066	Cellular Component	Ric1-Rgp1 guanyl-nucleotide exchange factor complex	Interproscan
GO:0042147	Biological Process	retrograde transport, endosome to Golgi	Interproscan
GO:0005884	Cellular Component	actin filament	Interproscan
GO:0006936	Biological Process	muscle contraction	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0032981	Biological Process	mitochondrial respiratory chain complex I assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09008	NDUFAF3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3	-	Mitochondrial biogenesis	ko03029	deepkoala