Gene detail

Detailed information of g97.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: WP_269023264.1, hypothetical protein [Bartonella sp. A05]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P36412	Ras-related protein Rab-11A OS=Dictyostelium discoideum OX=44689 GN=rab11A PE=1 SV=1
Q3U481	Major facilitator superfamily domain-containing protein 12 OS=Mus musculus OX=10090 GN=Mfsd12 PE=1 SV=1
A0A3Q2HW92	Major facilitator superfamily domain-containing protein 12 OS=Equus caballus OX=9796 GN=MFSD12 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000008 (this species only)
Orthogroup (gene family)	OG0000513 (this species only)
Orthogroup (gene family)	OG0000572 (this species only)
Orthogroup (gene family)	OG0000864 (this species only)
Orthogroup (gene family)	OG0000924 (this species only)
Orthogroup (gene family)	OG0001285 (this species only)
Orthogroup (gene family)	OG0006654 (this species only)
Orthogroup (gene family)	OG0012408 (this species only)
Orthogroup (gene family)	OG0013639 (this species only)
Orthogroup (gene family)	OG0017420 (this species only)
Orthogroup (gene family)	OG0017734 (this species only)
Orthogroup (gene family)	OG0080460 (this species only)
Orthogroup (gene family)	OG0080499 (this species only)
Orthogroup (gene family)	OG0170697 (this species only)
Orthogroup (gene family)	OG0174477 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|CUE · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03167 all species →	UDG	Uracil DNA glycosylase superfamily	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF12662 all species →	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF13895 all species →	Ig_2	Immunoglobulin domain	Domain	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF02845 all species →	CUE	CUE domain	Domain	Interproscan
PF13347 all species →	MFS_2	MFS/sugar transport protein	Family	Interproscan
PF02668 all species →	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan
PF00485 all species →	PRK	Phosphoribulokinase / Uridine kinase family	Domain	Interproscan
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005273 all species →	Domain	Uracil-DNA glycosylase family 4	Interproscan
IPR036895 all species →	Homologous_superfamily	Uracil-DNA glycosylase-like domain superfamily	Interproscan
IPR051536 all species →	Family	Uracil-DNA glycosylase family, Type-4/5	Interproscan
IPR005122 all species →	Domain	Uracil-DNA glycosylase-like	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR052080 all species →	Family	von Willebrand factor C/EGF & Fibrillin	Interproscan
IPR026823 all species →	Domain	Complement Clr-like EGF domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR003892 all species →	Domain	Ubiquitin system component CUE	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR040195 all species →	Domain	CUE domain-containing protein 1, CUE domain	Interproscan
IPR040192 all species →	Family	CUE domain-containing protein 1	Interproscan
IPR039672 all species →	Family	Lactose permease-like	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR003819 all species →	Domain	TauD/TfdA-like domain	Interproscan
IPR042098 all species →	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR050411 all species →	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006083 all species →	Domain	Phosphoribulokinase/uridine kinase	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33693 all species →	TYPE-5 URACIL-DNA GLYCOSYLASE	Interproscan
PTHR47333 all species →	VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR13467 all species →	CUE DOMAIN CONTAINING PROTEIN 1	Interproscan
PTHR11328 all species →	MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10696 all species →	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan
PTHR10285 all species →	URIDINE KINASE	Interproscan
PTHR47981 all species →	RAB FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008643 all species →	Biological Process	carbohydrate transport	Interproscan
GO:0015293 all species →	Molecular Function	symporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0071702 all species →	Biological Process	obsolete organic substance transport	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0050262 all species →	Molecular Function	ribosylnicotinamide kinase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0005770 all species →	Cellular Component	late endosome	Interproscan
GO:0008333 all species →	Biological Process	endosome to lysosome transport	Interproscan
GO:0045335 all species →	Cellular Component	phagocytic vesicle	Interproscan
GO:0090385 all species →	Biological Process	phagosome-lysosome fusion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07918	RAB32; Ras-related protein Rab-32	-	GTP-binding proteins	ko04031	deepkoala
K26437	MFSD12; major facilitator superfamily domain-containing protein 12	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.