Detailed information of g978.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAB4026785.1, Hypothetical predicted protein, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9C0K3Actin-related protein 3C OS=Homo sapiens OX=9606 GN=ACTR3C PE=1 SV=1
O73723Actin-related protein 3 OS=Takifugu rubripes OX=31033 GN=actr3 PE=3 SV=1
Q90WD0Actin-related protein 3 OS=Gallus gallus OX=9031 GN=ACTR3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20691TAGTTET-Associated GlycosyltransferaseDomainInterproscan
PF20692cpSF2-GREB1Circularly permuted SF2 helicase found in GREB1 proteinsDomainInterproscan
PF20267GREB1_CGREB1 C-terminal regionDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF07984NTP_transf_7Nucleotidyltransferase DomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF00022ActinActinFamilyInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF15782GREB1_NGREB1 N-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049100DomainTET-Associated GlycosyltransferaseInterproscan
IPR028422FamilyGREB1Interproscan
IPR048657DomainGREB1-like, circularly permuted SF2 helicase domainInterproscan
IPR046927DomainGREB1-like, C-terminal domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR029865FamilyDyslexia-associated protein KIAA0319-likeInterproscan
IPR012937FamilyTerminal nucleotidyltransferaseInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR004000FamilyActin familyInterproscan
IPR051480FamilyEndocytic & GEF AdapterInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR046926DomainGREB1, N-terminal domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15720GREB1-RELATEDInterproscan
PTHR46182FI19480P1Interproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR12974PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44Interproscan
PTHR46006RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM AInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0001764Biological Processneuron migrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:1990817Molecular Functionpoly(A) RNA polymerase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0048255Biological ProcessmRNA stabilizationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0035025Biological Processpositive regulation of Rho protein signal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23034TENT5C, FAM46C; terminal nucleotidyltransferase 5CEC:2.7.7.19
Messenger RNA biogenesisko03019deepkoala

TOP