Gene detail

Detailed information of g981.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAI8485195.1, hypothetical protein Bbelb_371200 [Branchiostoma belcheri]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P49793	Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2
P52948	Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens OX=9606 GN=NUP98 PE=1 SV=4
Q6PFD9	Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13634	Nucleoporin_FG	Nucleoporin FG repeat region	Family	Interproscan
PF21240	Nup98_GLEBS	Nup98, Gle2-binding sequence	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF10280	Med11	Mediator complex protein	Family	Interproscan
PF03351	DOMON	DOMON domain	Domain	Interproscan
PF07699	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025574	Repeat	Nucleoporin FG repeat	Interproscan
IPR037665	Family	Nucleoporin peptidase S59-like	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR051616	Family	Cul2-RING E3 ligase substrate-recognition	Interproscan
IPR019404	Family	Mediator complex, subunit Med11	Interproscan
IPR005018	Domain	DOMON domain	Interproscan
IPR000945	Family	Dopamine beta-hydroxylase-like	Interproscan
IPR045266	Domain	Copper-dependent monooxygenases, DOMON domain	Interproscan
IPR011641	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR039181	Family	EIG121-like	Interproscan
IPR009011	Homologous_superfamily	Mannose-6-phosphate receptor binding domain superfamily	Interproscan
IPR044865	Domain	MRH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23198	NUCLEOPORIN	Interproscan
PTHR46224	ANKYRIN REPEAT FAMILY PROTEIN	Interproscan
PTHR22890	UNCHARACTERIZED	Interproscan
PTHR10157	DOPAMINE BETA HYDROXYLASE RELATED	Interproscan
PTHR22727	PROTEIN CBG13728	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000973	Biological Process	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006405	Biological Process	RNA export from nucleus	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0008139	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0034398	Biological Process	telomere tethering at nuclear periphery	Interproscan
GO:0044614	Cellular Component	nuclear pore cytoplasmic filaments	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016592	Cellular Component	mediator complex	Interproscan
GO:0004500	Molecular Function	dopamine beta-monooxygenase activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01558	WNT16; wingless-type MMTV integration site family, member 16	-	Glycosaminoglycan binding proteins	ko00536	deepkoala