Detailed information of g984.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032226538.2, tetratricopeptide repeat protein 28 isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q80XJ3Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3
Q96AY4Tetratricopeptide repeat protein 28 OS=Homo sapiens OX=9606 GN=TTC28 PE=1 SV=4
P25407Hsp70-Hsp90 organising protein (Fragment) OS=Plasmodium falciparum OX=5833 GN=HOP PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00330AconitaseAconitase family (aconitate hydratase)FamilyInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF05557MADMitotic checkpoint proteinCoiled-coilInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF21530Pif1_2B_domDNA helicase Pif1, 2B domainDomainInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR050713FamilyReceptor-type Tyrosine-protein Phosphatases/UshersInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050926FamilyAconitase/IPM IsomeraseInterproscan
IPR015931Homologous_superfamilyAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3Interproscan
IPR015932Homologous_superfamilyAconitase, domain 2Interproscan
IPR001030DomainAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainInterproscan
IPR018136Binding_siteAconitase family, 4Fe-4S cluster binding siteInterproscan
IPR036008Homologous_superfamilyAconitase, iron-sulfur domainInterproscan
IPR015928Homologous_superfamilyAconitase/3-isopropylmalate dehydratase, swivelInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR008672FamilySpindle assembly checkpoint component Mad1Interproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR049163DomainDNA helicase Pif1-like, 2B domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR016193Homologous_superfamilyCytidine deaminase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11929ALPHA- 1,3 -FUCOSYLTRANSFERASEInterproscan
PTHR46957CYTOKINE RECEPTORInterproscan
PTHR22904TPR REPEAT CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR43160ACONITATE HYDRATASE BInterproscan
PTHR34718PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23168MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1Interproscan
PTHR24178MOLTING PROTEIN MLT-4Interproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0036065Biological ProcessfucosylationInterproscan
GO:0046920Molecular Functionalpha-(1->3)-fucosyltransferase activityInterproscan
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0051879Molecular FunctionHsp90 protein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003994Molecular Functionaconitate hydratase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0051539Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0007094Biological Processmitotic spindle assembly checkpoint signalingInterproscan
GO:0051315Biological Processattachment of mitotic spindle microtubules to kinetochoreInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan
GO:0097543Cellular Componentciliary inversin compartmentInterproscan
GO:1904108Biological Processprotein localization to ciliary inversin compartmentInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21412ANKLE2, LEM4; ankyrin repeat and LEM domain-containing protein 2-Carbon fixation pathways in prokaryotesko00720deepkoala
Chromosome and associated proteinsko03036deepkoala

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