Gene detail

Detailed information of g985.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: EFX64633.1, hypothetical protein DAPPUDRAFT_118007 [Daphnia pulex]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IWF2	FAD-dependent oxidoreductase domain-containing protein 2 OS=Homo sapiens OX=9606 GN=FOXRED2 PE=1 SV=1
Q3USW5	FAD-dependent oxidoreductase domain-containing protein 2 OS=Mus musculus OX=10090 GN=Foxred2 PE=2 SV=1
B0UXS1	FAD-dependent oxidoreductase domain-containing protein 2 OS=Danio rerio OX=7955 GN=foxred2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000003 (this species only)
Orthogroup (gene family)	OG0000144 (this species only)
Orthogroup (gene family)	OG0001544 (this species only)
Orthogroup (gene family)	OG0002526 (this species only)
Orthogroup (gene family)	OG0004219 (this species only)
Orthogroup (gene family)	OG0008779 (this species only)
Orthogroup (gene family)	OG0009804 (this species only)
Orthogroup (gene family)	OG0012644 (this species only)
Orthogroup (gene family)	OG0017419 (this species only)
Orthogroup (gene family)	OG0024478 (this species only)
Orthogroup (gene family)	OG0041286 (this species only)
Orthogroup (gene family)	OG0059516 (this species only)
Orthogroup (gene family)	OG0059557 (this species only)
Orthogroup (gene family)	OG0170810 (this species only)
Orthogroup (gene family)	OG0171982 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07742 all species →	BTG	BTG family	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF04434 all species →	SWIM	SWIM zinc finger	Domain	Interproscan
PF00043 all species →	GST_C	Glutathione S-transferase, C-terminal domain	Domain	Interproscan
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan
PF13738 all species →	Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	Family	Interproscan
PF00385 all species →	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan
PF13517 all species →	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF05605 all species →	zf-Di19	Drought induced 19 protein (Di19), zinc-binding	Domain	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036054 all species →	Homologous_superfamily	BTG-like domain superfamily	Interproscan
IPR033332 all species →	Family	BTG family	Interproscan
IPR002087 all species →	Domain	Anti-proliferative protein	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR007527 all species →	Domain	Zinc finger, SWIM-type	Interproscan
IPR004046 all species →	Domain	Glutathione S-transferase, C-terminal	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR051369 all species →	Family	Glutathione S-transferase Theta	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050982 all species →	Family	Auxin biosynthesis and cation transport	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR016197 all species →	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR000953 all species →	Domain	Chromo/chromo shadow domain	Interproscan
IPR043000 all species →	Family	Chromobox protein homolog 7	Interproscan
IPR023780 all species →	Domain	Chromo domain	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR008598 all species →	Domain	Drought induced 19 protein type, zinc-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22978 all species →	B-CELL TRANSLOCATION GENE	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR47456 all species →	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43917 all species →	-	Interproscan
PTHR43539 all species →	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	Interproscan
PTHR33244 all species →	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR47277 all species →	CHROMOBOX PROTEIN HOMOLOG 7	Interproscan
PTHR24409 all species →	ZINC FINGER PROTEIN 142	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008285 all species →	Biological Process	negative regulation of cell population proliferation	Interproscan
GO:0045930 all species →	Biological Process	negative regulation of mitotic cell cycle	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004364 all species →	Molecular Function	glutathione transferase activity	Interproscan
GO:0006749 all species →	Biological Process	glutathione metabolic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005788 all species →	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0031519 all species →	Cellular Component	PcG protein complex	Interproscan
GO:0035102 all species →	Cellular Component	PRC1 complex	Interproscan
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00799	GST, gst; glutathione S-transferase	EC:2.5.1.18	Transporters	ko02000	deepkoala
K14443	TOB; protein Tob/BTG	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.