Gene detail

Detailed information of g9903.t1 in Tripedalia maipoensis

Genomic Location: scaffold_6:28374803...28379261
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05025 all species →	RbsD_FucU	RbsD / FucU transport protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023750 all species →	Homologous_superfamily	RbsD-like superfamily	Interproscan
IPR050443 all species →	Family	RbsD/FucU L-fucose mutarotase	Interproscan
IPR007721 all species →	Family	D-ribose pyranase RbsD/L-fucose mutarotase FucU	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31690 all species →	FUCOSE MUTAROTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005996 all species →	Biological Process	monosaccharide metabolic process	Interproscan
GO:0016853 all species →	Molecular Function	isomerase activity	Interproscan
GO:0048029 all species →	Molecular Function	monosaccharide binding	Interproscan
GO:0006004 all species →	Biological Process	fucose metabolic process	Interproscan
GO:0016857 all species →	Molecular Function	racemase and epimerase activity, acting on carbohydrates and derivatives	Interproscan
GO:0036065 all species →	Biological Process	fucosylation	Interproscan
GO:0042806 all species →	Molecular Function	fucose binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02431	fucU, FUOM; L-fucose mutarotase	EC:5.1.3.29	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.