Gene detail

Detailed information of g9908.t1 in Tripedalia maipoensis

Genomic Location: scaffold_6:28533177...28558081
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02020 all species →	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043510 all species →	Domain	BZW1/2, W2 domain	Interproscan
IPR003307 all species →	Domain	W2 domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR051245 all species →	Family	eIF5-mimic translation initiation regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14208 all species →	BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02523	ispB; octaprenyl-diphosphate synthase	EC:2.5.1.90	Prenyltransferases	ko01006	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.