Gene detail

Detailed information of g992.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_022779014.1, copper homeostasis protein cutC homolog isoform X1 [Stylophora pistillata]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NTM9	Copper homeostasis protein cutC homolog OS=Homo sapiens OX=9606 GN=CUTC PE=1 SV=1
Q9D8X1	Copper homeostasis protein cutC homolog OS=Mus musculus OX=10090 GN=Cutc PE=1 SV=1
Q73KH5	PF03932 family protein CutC OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=cutC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000393 (this species only)
Orthogroup (gene family)	OG0000684 (this species only)
Orthogroup (gene family)	OG0000715 (this species only)
Orthogroup (gene family)	OG0000755 (this species only)
Orthogroup (gene family)	OG0001163 (this species only)
Orthogroup (gene family)	OG0001299 (this species only)
Orthogroup (gene family)	OG0002266 (this species only)
Orthogroup (gene family)	OG0002623 (this species only)
Orthogroup (gene family)	OG0004034 (this species only)
Orthogroup (gene family)	OG0004101 (this species only)
Orthogroup (gene family)	OG0014200 (this species only)
Orthogroup (gene family)	OG0080681 (this species only)
Orthogroup (gene family)	OG0172314 (this species only)
Orthogroup (gene family)	OG0173053 (this species only)
Orthogroup (gene family)	OG0173609 (this species only)
Transcription factor family	T-box · all TF in this species
Transcription factor family	THAP · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17919 all species →	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00615 all species →	RGS	Regulator of G protein signaling domain	Domain	Interproscan
PF00907 all species →	T-box	T-box	Domain	Interproscan
PF00821 all species →	PEPCK_GTP	Phosphoenolpyruvate carboxykinase C-terminal P-loop domain	Domain	Interproscan
PF03932 all species →	CutC	CutC family	Domain	Interproscan
PF05485 all species →	THAP	THAP domain	Domain	Interproscan
PF21033 all species →	RMD1-3	Regulator of microtubule dynamics protein 1-3	Repeat	Interproscan
PF08236 all species →	SRI	SRI (Set2 Rpb1 interacting) domain	Domain	Interproscan
PF00856 all species →	SET	SET domain	Family	Interproscan
PF00397 all species →	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041577 all species →	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR043541 all species →	Family	Synaptotagmin-14/14L/16	Interproscan
IPR016137 all species →	Domain	RGS domain	Interproscan
IPR036305 all species →	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR044926 all species →	Homologous_superfamily	RGS, subdomain 2	Interproscan
IPR001699 all species →	Family	T-box transcription factor	Interproscan
IPR046360 all species →	Domain	T-box transcription factor, DNA-binding domain	Interproscan
IPR018186 all species →	Conserved_site	Transcription factor, T-box, conserved site	Interproscan
IPR036960 all species →	Homologous_superfamily	T-box superfamily	Interproscan
IPR008967 all species →	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR051017 all species →	Family	Aldolase class II Adducin subfamily	Interproscan
IPR035077 all species →	Domain	Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain	Interproscan
IPR013035 all species →	Homologous_superfamily	Phosphoenolpyruvate carboxykinase, C-terminal	Interproscan
IPR008209 all species →	Family	Phosphoenolpyruvate carboxykinase, GTP-utilising	Interproscan
IPR005627 all species →	Family	CutC-like	Interproscan
IPR036822 all species →	Homologous_superfamily	CutC-like domain superfamily	Interproscan
IPR006612 all species →	Domain	THAP-type zinc finger	Interproscan
IPR052224 all species →	Family	THAP domain-containing protein	Interproscan
IPR038441 all species →	Homologous_superfamily	THAP-type zinc finger superfamily	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR049039 all species →	Repeat	Regulator of microtubule dynamics protein 1-3, alpha helical repeats	Interproscan
IPR001202 all species →	Domain	WW domain	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR013257 all species →	Domain	Set2 Rpb1 interacting domain	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR038190 all species →	Homologous_superfamily	Set2 Rpb1 interacting domain superfamily	Interproscan
IPR042294 all species →	Family	Histone-lysine N-methyltransferase SETD2, animal	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR46129 all species →	SYNAPTOTAGMIN 14, ISOFORM D	Interproscan
PTHR10845 all species →	REGULATOR OF G PROTEIN SIGNALING	Interproscan
PTHR11267 all species →	T-BOX PROTEIN-RELATED	Interproscan
PTHR10672 all species →	ADDUCIN	Interproscan
PTHR11561 all species →	PHOSPHOENOLPYRUVATE CARBOXYKINASE	Interproscan
PTHR12598 all species →	COPPER HOMEOSTASIS PROTEIN CUTC	Interproscan
PTHR46927 all species →	AGAP005574-PA	Interproscan
PTHR16056 all species →	REGULATOR OF MICROTUBULE DYNAMICS PROTEIN	Interproscan
PTHR46711 all species →	HISTONE-LYSINE N-METHYLTRANSFERASE SETD2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005543 all species →	Molecular Function	phospholipid binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001708 all species →	Biological Process	cell fate specification	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0004611 all species →	Molecular Function	phosphoenolpyruvate carboxykinase activity	Interproscan
GO:0006094 all species →	Biological Process	gluconeogenesis	Interproscan
GO:0017076 all species →	Molecular Function	purine nucleotide binding	Interproscan
GO:0004613 all species →	Molecular Function	phosphoenolpyruvate carboxykinase (GTP) activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019543 all species →	Biological Process	propionate catabolic process	Interproscan
GO:0030145 all species →	Molecular Function	manganese ion binding	Interproscan
GO:0033993 all species →	Biological Process	response to lipid	Interproscan
GO:0042594 all species →	Biological Process	response to starvation	Interproscan
GO:0046327 all species →	Biological Process	glycerol biosynthetic process from pyruvate	Interproscan
GO:0071333 all species →	Biological Process	cellular response to glucose stimulus	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005876 all species →	Cellular Component	spindle microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0097431 all species →	Cellular Component	mitotic spindle pole	Interproscan
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0016279 all species →	Molecular Function	protein-lysine N-methyltransferase activity	Interproscan
GO:0046975 all species →	Molecular Function	histone H3K36 methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06201	cutC; copper homeostasis protein	-	Others	-	deepkoala
K11423	SETD2; [histone H3]-lysine36 N-trimethyltransferase	EC:2.1.1.359	Chromosome and associated proteins	ko03036	deepkoala
K19328	SYT14_16; synaptotagmin-14/16	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.