Detailed information of g993.t1 in Tripedalia maipoensis

Genomic Location: scaffold_1:49454995...49508530
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10304
all species →
RTP1_C2Required for nuclear transport of RNA pol II C-terminus 2RepeatInterproscan
PF10363
all species →
RTP1_C1Required for nuclear transport of RNA pol II C-terminus 1RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039600
all species →
FamilyTANGO6/Rtp1Interproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR019414
all species →
DomainRNA polymerase II assembly factor Rtp1, C-terminal domain 2Interproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR019451
all species →
DomainRNA polymerase II assembly factor Rtp1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20959
all species →
TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009306
all species →
Biological Processprotein secretionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g993.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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